| Method / sample set | ΔH | ΔS estimate |
|---|---|---|
| uMLIP (PBE sample set) |
0.173461 ± 0.00956 eV/atom
16.7364 ± 0.922 kJ/mol of atoms
|
0.000125965 ± 8.11e-06
eV/(atom K)
12.1538 ± 0.782 J/(mol of atoms K)
|
| PBE |
0.16217 ± 0.00841 eV/atom
15.6471 ± 0.811 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
12.1538 ± 0.782 J/(mol of atoms K)
|
| uMLIP (R2SCAN sample set) |
0.173461 ± 0.00956 eV/atom
16.7364 ± 0.922 kJ/mol of atoms
|
0.000125965 ± 8.11e-06
eV/(atom K)
12.1538 ± 0.782 J/(mol of atoms K)
|
| R2SCAN |
0.182926 ± 0.00951 eV/atom
17.6496 ± 0.918 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
12.1538 ± 0.782 J/(mol of atoms K)
|
ΔH is the liquid-minus-solid value reported by the existing correction workflow. Each uMLIP row uses the sample set matched to that DFT method. Uncertainties are standard errors; — means unavailable.
ΔS is estimated as ΔHuMLIP/Tm,uMLIP. Its propagated uncertainty assumes these two quantities are independent. The current PBE/R2SCAN correction inherits this entropy estimate; it is not an independently calculated DFT entropy.
| Sample set | Cp,solid | Cp,liquid |
|---|---|---|
| uMLIP (PBE sample set) |
13.0916 J/(mol of atoms K)
0.000135684 eV/(atom K)
|
31.7203 J/(mol of atoms K)
0.000328758 eV/(atom K)
|
| uMLIP (R2SCAN sample set) |
13.0916 J/(mol of atoms K)
0.000135684 eV/(atom K)
|
31.7203 J/(mol of atoms K)
0.000328758 eV/(atom K)
|
Values reported in SLUSCHI.out by the correction workflow. These are uMLIP potential-energy–temperature slopes for the PBE/R2SCAN sample sets, not full thermodynamic heat capacities or independent DFT heat capacities. The workflow may substitute the other phase's slope when one is unavailable. Uncertainties are not reported; — means unavailable.
| Vsolid [ų/atom] | Vliquid [ų/atom] | ΔV [ų/atom] |
|---|---|---|
| 12.652 ± 0.0526 | 13.5038 ± 0.0931 | 0.851843 ± 0.0814 |
=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
4.3814397400000002 0.0000000000000000 -10.118499790000001
9.4931187700000006 -4.1308621199999997 3.7944374399999998
-3.6512014500000003 -10.327155299999999 -1.2648124999999997
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
11.026 11.026 11.026 88.492 91.508 88.492
In UNIT-cell, number of atoms: 1 total: 1
Inverse Matrix is:
3.3162420292430300E-002 7.8029223686747626E-002 -3.1211689474699052E-002
-1.3793796736934860E-003 -3.1725625182295970E-002 -8.4141836881366117E-002
-8.4469127992753884E-002 3.3787651197101552E-002 -1.3515060478840622E-002
In SUPER-cell, number of atoms: 117 total: 117
POSCAR_STRCT atoms = 117
Accepted radius = 11 with 117 atoms
====================================================================================================
=== SLUSCHI fit-first-1-guard1; source: /data/qhong7/qhong7/sluschi_lammps/src/ ===
/data/qhong7/qhong7/sluschi_auto/f1000b06-bac8-42f2-8382-886169f08301/Cu/Dir_lammps
['Cu']
elements: ['Cu']
counts: [117]
solid atom IDs: 1:117
liquid atom IDs: 118:234
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 500/1, step_param=1000
Pressure trial 1: scale=1.0
Pressure = 23217.4222
Pressure trial 2: scale=1.01
Pressure = -12701.0331
Pressure trial 3: scale=1.0050000000000001
Pressure = 4406.14973
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1000 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1000/1, step_param=1000
Pressure trial 1: scale=1.0050000000000001
Pressure = 63914.7153
Pressure trial 2: scale=1.0150000000000001
Pressure = 26407.3981
Pressure trial 3: scale=1.0250000000000001
Pressure = -5201.786223
Pressure trial 4: scale=1.0200000000000002
Pressure = 9731.40846
Pressure trial 5: scale=1.0225000000000002
Pressure = 2372.546544
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1000 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1500 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1500/1, step_param=1000
Pressure trial 1: scale=1.0225000000000002
Pressure = 39379.28
Pressure trial 2: scale=1.0325000000000002
Pressure = 13536.51817
Pressure trial 3: scale=1.0425000000000002
Pressure = -14710.5743
Pressure trial 4: scale=1.0375000000000003
Pressure = 66.15743
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Initial scan stopped at 1500 K: confirmed liquid. Fitting before further MD.
Wrote summary.csv and summary.out for 3 trajectories
Wrote phase_pred.csv: {'solid': 2, 'liquid': 1}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
FIT NOW: reporting the partial batch before further MD.
=== running MPFit ===
Melting temperature and std error: 1017.1957800000000 5207.8237209980352
500 1 0 1
1000 1 0 1
1500 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 1250.0000000000000 K
1250, 1250, 1
Adaptive temp step = 100
1250 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1250/1, step_param=1000
Pressure trial 1: scale=1.0225000000000002
Pressure = 23883.41903
Pressure trial 2: scale=1.0325000000000002
Pressure = -8330.22044
Pressure trial 3: scale=1.0275000000000003
Pressure = 6371.85055
Pressure trial 4: scale=1.0300000000000002
Pressure = -654.187853
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1250 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 4 trajectories
Wrote phase_pred.csv: {'solid': 3, 'liquid': 1}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 1275.4312499999999 4948.8858579793396
500 1 0 1
1000 1 0 1
1250 1 0 1
1500 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 1375.0000000000000 K
1375, 1375, 1
Adaptive temp step = 100
1375 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1375/1, step_param=1000
Pressure trial 1: scale=1.0375000000000003
Pressure = -5496.607119
Pressure trial 2: scale=1.0325000000000004
Pressure = 6622.78356
Pressure trial 3: scale=1.0350000000000004
Pressure = -2155.729721
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1375 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 5 trajectories
Wrote phase_pred.csv: {'solid': 3, 'liquid': 2}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 1274.8314000000003 4950.5076652133994
500 1 0 1
1000 1 0 1
1250 1 0 1
1375 0 1 1
1500 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 1250.0000000000000 K
next job: 4 MD duplicate(s) at 1375.0000000000000 K
1250, 1250, 4
Adaptive temp step = 100
1250 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 1250/2, step_param=1100
Pressure trial 1: scale=1.0300000000000002
Pressure = 2484.102761
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1250 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 1250/3, step_param=1200
Pressure trial 1: scale=1.0300000000000002
Pressure = 1065.27047
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1250 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 1250/4, step_param=1300
Pressure trial 1: scale=1.0300000000000002
Pressure = -178.209111
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1250 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
1375, 1375, 4
Adaptive temp step = 100
1375 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 1375/2, step_param=1100
Pressure trial 1: scale=1.0350000000000004
Pressure = 1331.706297
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1375 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 1375/3, step_param=1200
Pressure trial 1: scale=1.0350000000000004
Pressure = -3572.993856
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1375 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 1375/4, step_param=1300
Pressure trial 1: scale=1.0350000000000004
Pressure = -4126.991656
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1375 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 11 trajectories
Wrote phase_pred.csv: {'solid': 8, 'liquid': 3}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 1368.7619439999999 4497.2105169525757
500 1 0 1
1000 1 0 1
1250 4 0 4
1375 2 2 4
1500 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 1500.0000000000000 K
next job: 4 MD duplicate(s) at 1500.0000000000000 K
1500, 1500, 4
Adaptive temp step = 100
1500 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 1500/2, step_param=1100
Pressure trial 1: scale=1.0375000000000003
Pressure = -4075.51195
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1500 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 1500/3, step_param=1200
Pressure trial 1: scale=1.0375000000000003
Pressure = -647.1473
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1500 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 1500/4, step_param=1300
Pressure trial 1: scale=1.0375000000000003
Pressure = -1973.7681
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1500 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
1500, 1500, 4
Adaptive temp step = 100
1500 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 14 trajectories
Wrote phase_pred.csv: {'solid': 8, 'liquid': 6}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 1377.0529743741886 45.772453153693029
500 1 0 1
1000 1 0 1
1250 4 0 4
1375 2 2 4
1500 0 4 4
current fit
1 1377.0529743741886 45.772453153693029
possibilities:
current fit
0 1377.0529743741886 45.772453153693029
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg phase left_phase right_phase left_D [cm^2/s] right_D [cm^2/s] phase_reason last_md_step phase_check
1000/1 -3.963891 0.127893 993.668293 12.349433 13230.958010 -0.00000243 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11100 RESOLVED
1250/1 -3.925433 0.162190 1260.138610 12.518679 14710.037235 -0.00000520 down 3.04292965e-08 P1 (1) solid solid solid 0.00000000e+00 1.55439411e-07 Both original halves agree 11100 RESOLVED
1250/2 -3.925783 0.161085 1251.558160 12.514961 15116.885610 -0.00000417 down 0.00000000e+00 P1 (1) solid solid solid 1.02448575e-08 0.00000000e+00 Both original halves agree 11200 RESOLVED
1250/3 -3.924260 0.160773 1249.134045 12.517522 15266.967835 -0.00000760 down 8.99257273e-08 P1 (1) solid solid solid 4.91736137e-09 1.74934093e-07 Both original halves agree 11300 RESOLVED
1250/4 -3.921878 0.163240 1268.301035 12.592276 8736.848959 -0.00001109 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11400 RESOLVED
1375/1 -3.765072 0.176675 1372.684510 13.485285 -1724.249900 0.00000419 up 2.92957409e-05 P1 (1) liquid liquid liquid 2.41226402e-05 3.44688416e-05 Both original halves agree 11100 RESOLVED
1375/2 -3.887768 0.177911 1382.286630 12.847069 -1562.725066 -0.00001371 down 1.19662093e-07 P1 (1) solid solid solid 0.00000000e+00 3.24394869e-07 Both original halves agree 11200 RESOLVED
1375/3 -3.765206 0.177154 1376.406935 13.514758 -4827.146575 0.00000393 up 2.68721207e-05 P1 (1) liquid liquid liquid 3.21513387e-05 2.15929028e-05 Both original halves agree 11300 RESOLVED
1375/4 -3.901664 0.175026 1359.870325 12.621420 15722.658350 -0.00000636 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 4.26765290e-09 Both original halves agree 11400 RESOLVED
1500/1 -3.736311 0.191159 1485.218110 13.656420 -2123.508703 0.00000562 up 3.77077682e-05 P1 (1) liquid liquid liquid 3.59011070e-05 3.95144294e-05 Both original halves agree 11100 RESOLVED
1500/2 -3.732739 0.191510 1487.946235 13.712698 -3775.518396 0.00000498 up 3.33138085e-05 P1 (1) liquid liquid liquid 3.34361348e-05 3.31914821e-05 Both original halves agree 11200 RESOLVED
1500/3 -3.729825 0.191849 1490.580925 13.748292 -6683.151203 0.00000402 up 4.54703877e-05 P1 (1) liquid liquid liquid 4.01380952e-05 5.08026803e-05 Both original halves agree 11300 RESOLVED
1500/4 -3.730247 0.194149 1508.445320 13.806974 -10571.674930 0.00000343 up 5.31958097e-05 P1 (1) liquid liquid liquid 5.73853943e-05 4.90062251e-05 Both original halves agree 11400 RESOLVED
500/1 -4.032922 0.065383 507.996787 12.158614 -1828.813425 -0.00000016 down 1.51231701e-08 P1 (1) solid solid solid 3.02232720e-08 2.30682673e-11 Both original halves agree 11100 RESOLVED
======================================================================================================================================================
Wrote summary.csv and summary.out for 14 trajectories
Wrote phase_pred.csv: {'solid': 8, 'liquid': 6}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
Wrote /data/qhong7/qhong7/sluschi_auto/f1000b06-bac8-42f2-8382-886169f08301/Cu/Dir_lammps/cost_table.out
Collected 42 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 14
Total log files (incl. subruns) = 42
Total wall time = 1:36:48
Total seconds = 5808
Total GPU hours = 1.61
====================================
=== DFT corrections begin ===
=== PBE correction ===
PBE_METHOD = PBE
N rows with PBE energy = 12
MT_LMP = 1377.0529743741886
STD_LMP = 45.77245315369303
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -3.91629302
PBE_energy_eV_per_atom = -3.55311487
N_solid_PBE = 6
SEM_lammps_solid_PBE = 3.92990643e-03 eV/atom
SEM_PBE_solid = 3.33374130e-03 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -3.74283224
PBE_energy_eV_per_atom = -3.39094461
N_liquid_PBE = 6
SEM_lammps_liquid_PBE = 8.71561334e-03 eV/atom
SEM_PBE_liquid = 7.71702114e-03 eV/atom
DH_LMP_raw_PBE = 0.17346078 eV/atom
DH_LMP_PBE = 0.17346078 eV/atom
DH_PBE = 0.16217026 eV/atom
STD_DH_LMP_PBE = 9.56065272e-03 eV/atom
STD_DH_PBE = 8.40632181e-03 eV/atom
COV_DH_PBE_LMP = 8.02845020e-05 (eV/atom)^2
Cp_solid_PBE = 1.35684444e-04 eV/atom/K
Cp_liquid_PBE = 3.28757692e-04 eV/atom/K
Cp_avg_PBE = 0.00000000e+00 eV/atom/K
DeltaT_PBE = 166.67 K
DH_raw_PBE = 0.16217026 eV/atom
MT_PBE = 1287.42095647 K
STD_PBE = 43.11795172 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 12
MT_LMP = 1377.0529743741886
STD_LMP = 45.77245315369303
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = -3.91629302
R2SCAN_energy_eV_per_atom = -10.61756308
N_solid_R2SCAN = 6
SEM_lammps_solid_R2SCAN = 3.92990643e-03 eV/atom
SEM_R2SCAN_solid = 4.48466321e-03 eV/atom
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = -3.74283224
R2SCAN_energy_eV_per_atom = -10.43463755
N_liquid_R2SCAN = 6
SEM_lammps_liquid_R2SCAN = 8.71561334e-03 eV/atom
SEM_R2SCAN_liquid = 8.38960493e-03 eV/atom
DH_LMP_raw_R2SCAN = 0.17346078 eV/atom
DH_LMP_R2SCAN = 0.17346078 eV/atom
DH_R2SCAN = 0.18292553 eV/atom
STD_DH_LMP_R2SCAN = 9.56065272e-03 eV/atom
STD_DH_R2SCAN = 9.51302660e-03 eV/atom
COV_DH_R2SCAN_LMP = 9.06246746e-05 (eV/atom)^2
Cp_solid_R2SCAN = 1.35684444e-04 eV/atom/K
Cp_liquid_R2SCAN = 3.28757692e-04 eV/atom/K
Cp_avg_R2SCAN = 0.00000000e+00 eV/atom/K
DeltaT_R2SCAN = 166.67 K
DH_raw_R2SCAN = 0.18292553 eV/atom
MT_R2SCAN = 1452.19082576 K
STD_R2SCAN = 48.92606673 K
=== DFT corrections end ===
Cu1 1.0 2.1907198700000001 0.0000000000000000 1.2648124800000000 0.7302402900000000 2.0654310599999999 1.2648124800000000 -0.0000000000000000 -0.0000000000000000 2.5296249500000001 Cu 1 direct -0.0000000000000000 -0.0000000000000000 -0.0000000000000000 Cu
No output files have been received yet.