| Method / sample set | ΔH | ΔS estimate |
|---|---|---|
| uMLIP (PBE sample set) |
0.291303 ± 0.0127 eV/atom
28.1064 ± 1.23 kJ/mol of atoms
|
0.000132568 ± 8.7e-06
eV/(atom K)
12.7908 ± 0.839 J/(mol of atoms K)
|
| PBE |
0.293865 ± 0.0133 eV/atom
28.3536 ± 1.29 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
12.7908 ± 0.839 J/(mol of atoms K)
|
| uMLIP (R2SCAN sample set) |
0.291303 ± 0.0127 eV/atom
28.1064 ± 1.23 kJ/mol of atoms
|
0.000132568 ± 8.7e-06
eV/(atom K)
12.7908 ± 0.839 J/(mol of atoms K)
|
| R2SCAN |
0.33686 ± 0.0148 eV/atom
32.502 ± 1.43 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
12.7908 ± 0.839 J/(mol of atoms K)
|
ΔH is the liquid-minus-solid value reported by the existing correction workflow. Each uMLIP row uses the sample set matched to that DFT method. Uncertainties are standard errors; — means unavailable.
ΔS is estimated as ΔHuMLIP/Tm,uMLIP. Its propagated uncertainty assumes these two quantities are independent. The current PBE/R2SCAN correction inherits this entropy estimate; it is not an independently calculated DFT entropy.
| Sample set | Cp,solid | Cp,liquid |
|---|---|---|
| uMLIP (PBE sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
| uMLIP (R2SCAN sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
Values reported in SLUSCHI.out by the correction workflow. These are uMLIP potential-energy–temperature slopes for the PBE/R2SCAN sample sets, not full thermodynamic heat capacities or independent DFT heat capacities. The workflow may substitute the other phase's slope when one is unavailable. Uncertainties are not reported; — means unavailable.
| Vsolid [ų/atom] | Vliquid [ų/atom] | ΔV [ų/atom] |
|---|---|---|
| 13.3495 ± 0.12 | 14.538 ± 0.182 | 1.18853 ± 0.161 |
=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
8.0530991699999994 0.0000000000000000 5.6944007800000005
-4.0265495800000002 6.9741889500000003 5.6944007800000005
-4.0265495899999992 -6.9741889500000003 5.6944017799999997
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
9.863 9.863 9.863 90.000 90.000 90.000
In UNIT-cell, number of atoms: 16 24 total: 40
Inverse Matrix is:
8.2783866447656118E-002 -4.1391929589386860E-002 -4.1391929589386860E-002
4.1373407392274676E-009 7.1692928462380554E-002 -7.1692920009648567E-002
5.8537030795536960E-002 5.8537030795536966E-002 5.8537030795536966E-002
In SUPER-cell, number of atoms: 32 48 total: 80
POSCAR_STRCT atoms = 80
Accepted radius = 11 with 80 atoms
====================================================================================================
=== SLUSCHI fit-first-1-guard1; source: /data/qhong7/qhong7/sluschi_lammps/src/ ===
/data/qhong7/qhong7/sluschi_auto/f01743ec-3e2d-40f2-8605-397aed0f3f61/Sc16O24/Dir_lammps
['Sc', 'O']
elements: ['Sc', 'O']
counts: [32, 48]
solid atom IDs: 1:80
liquid atom IDs: 81:160
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 500/1, step_param=1000
Pressure trial 1: scale=1.0
Pressure = 10668.00562
Pressure trial 2: scale=1.01
Pressure = -29234.0679
Pressure trial 3: scale=1.0050000000000001
Pressure = -10336.66988
Pressure trial 4: scale=1.0000000000000002
Pressure = 10667.55172
Pressure trial 5: scale=1.0025000000000002
Pressure = -4.322522
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1000 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1000/1, step_param=1000
Pressure trial 1: scale=1.0025000000000002
Pressure = 25026.5715
Pressure trial 2: scale=1.0125000000000002
Pressure = -18716.4938
Pressure trial 3: scale=1.0075000000000003
Pressure = -1008.309255
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1000 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1500 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1500/1, step_param=1000
Pressure trial 1: scale=1.0075000000000003
Pressure = 55343.434
Pressure trial 2: scale=1.0175000000000003
Pressure = 13688.530948
Pressure trial 3: scale=1.0275000000000003
Pressure = -4196.716594
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
2000 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 2000/1, step_param=1000
Pressure trial 1: scale=1.0275000000000003
Pressure = 26739.46413
Pressure trial 2: scale=1.0375000000000003
Pressure = 10261.92642
Pressure trial 3: scale=1.0475000000000003
Pressure = -4335.90313
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
2000 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
500, 500, 1
Adaptive temp step = 100
500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1000, 1000, 1
Adaptive temp step = 100
1000 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1500, 1500, 1
Adaptive temp step = 100
1500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
2000, 2000, 1
Adaptive temp step = 100
2000 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 4 trajectories
Wrote phase_pred.csv: {'solid': 4}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2044.9288524999999 6612.4167887592530
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2800.0 K
2800, 2800, 1
Adaptive temp step = 100
2800 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 2800/1, step_param=1000
Pressure trial 1: scale=1.0475000000000003
Pressure = 23426.2215
Pressure trial 2: scale=1.0575000000000003
Pressure = 11070.8432
Pressure trial 3: scale=1.0675000000000003
Pressure = -2464.97208
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
2800 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Initial scan stopped at 2800 K: confirmed liquid. Fitting before further MD.
Wrote summary.csv and summary.out for 5 trajectories
Wrote phase_pred.csv: {'solid': 4, 'liquid': 1}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
FIT NOW: reporting the partial batch before further MD.
=== running MPFit ===
Melting temperature and std error: 2050.4090095999995 10801.156972576109
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2400.0000000000000 K
2400, 2400, 1
Adaptive temp step = 100
2400 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 2400/1, step_param=1000
Pressure trial 1: scale=1.0475000000000003
Pressure = 7558.1172
Pressure trial 2: scale=1.0575000000000003
Pressure = 160.4584
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
2400 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 6 trajectories
Wrote phase_pred.csv: {'solid': 4, 'liquid': 2}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2049.8939384000000 10848.630551866498
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 0 1 1
2800 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 2000.0000000000000 K
next job: 4 MD duplicate(s) at 2400.0000000000000 K
2000, 2000, 4
Adaptive temp step = 100
2000 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 2000/2, step_param=1100
Pressure trial 1: scale=1.0475000000000003
Pressure = -4799.174985
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
2000 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 2000/3, step_param=1200
Pressure trial 1: scale=1.0475000000000003
Pressure = -7865.92504
Pressure trial 2: scale=1.0425000000000004
Pressure = 4848.41788
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
2000 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 2000/4, step_param=1300
Pressure trial 1: scale=1.0425000000000004
Pressure = -14340.298071
Pressure trial 2: scale=1.0375000000000005
Pressure = -10093.50407
Pressure trial 3: scale=1.0325000000000006
Pressure = 8147.03845
Pressure trial 4: scale=1.0350000000000006
Pressure = 15805.54268
Pressure trial 5: scale=1.0375000000000005
Pressure = 9418.8764
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
2000 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
2400, 2400, 4
Adaptive temp step = 100
2400 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 2400/2, step_param=1100
Pressure trial 1: scale=1.0575000000000003
Pressure = -13053.50041
Pressure trial 2: scale=1.0525000000000004
Pressure = 8416.02348
Pressure trial 3: scale=1.0550000000000004
Pressure = -7055.5471
Pressure trial 4: scale=1.0537500000000004
Pressure = -1357.66229
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
2400 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 2400/3, step_param=1200
Pressure trial 1: scale=1.0537500000000004
Pressure = 4796.63592
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
2400 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 2400/4, step_param=1300
Pressure trial 1: scale=1.0537500000000004
Pressure = 2398.43884
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
2400 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 12 trajectories
Wrote phase_pred.csv: {'solid': 7, 'liquid': 5}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2197.3858065018590 107.58996286011410
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 4 0 4
2400 0 4 4
2800 0 1 1
current fit
1 2197.3858065018590 107.58996286011410
possibilities:
current fit
0 2197.3858065018590 107.58996286011410
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg phase left_phase right_phase left_D [cm^2/s] right_D [cm^2/s] phase_reason last_md_step phase_check
1000/1 -8.918398 0.127767 994.666515 12.603639 1041.697159 0.00000016 up 8.97260050e-09 Ia-3 (206) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11100 RESOLVED
1500/1 -8.852932 0.194274 1512.424575 12.657190 17438.181085 -0.00000230 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 6.42430964e-09 Both original halves agree 11100 RESOLVED
2000/1 -8.732933 0.251997 1961.792455 13.211358 4046.053140 -0.00000633 down 1.33353923e-07 P1 (1) solid solid solid 1.11458507e-07 0.00000000e+00 Both original halves agree 21100 RESOLVED
2000/2 -8.700024 0.259077 2016.913845 13.392627 -1209.780557 -0.00001625 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11200 RESOLVED
2000/3 -8.734037 0.259999 2024.086915 13.405184 -14253.777280 -0.00002342 down 1.93094257e-07 P1 (1) solid solid solid 0.00000000e+00 3.55431698e-07 Both original halves agree 11300 RESOLVED
2000/4 -8.737548 0.262764 2045.613970 13.081605 12491.630350 -0.00000869 down 1.04594379e-07 P1 (1) solid solid solid 0.00000000e+00 2.33787129e-07 Both original halves agree 11400 RESOLVED
2400/1 -8.440777 0.313950 2444.101140 14.757646 4179.834911 0.00000031 up 3.38687517e-05 P1 (1) liquid liquid liquid 4.44075422e-05 2.33299612e-05 Both original halves agree 11100 RESOLVED
2400/2 -8.448391 0.310967 2420.872415 14.819977 5630.615375 -0.00000134 down 2.26763378e-05 P1 (1) liquid liquid liquid 1.87559375e-05 2.65967381e-05 Both original halves agree 11200 RESOLVED
2400/3 -8.437864 0.309083 2406.211780 14.962207 -1531.505641 0.00000281 up 3.36133436e-05 P1 (1) liquid liquid liquid 3.52955730e-05 3.19311142e-05 Both original halves agree 11300 RESOLVED
2400/4 -8.433080 0.307900 2397.002575 14.853693 -482.174955 0.00000195 up 2.23512597e-05 P1 (1) liquid liquid liquid 1.90980932e-05 2.56044262e-05 Both original halves agree 11400 RESOLVED
2800/1 -8.341410 0.354511 2759.864115 15.461155 8830.646795 0.00000557 up 5.94728259e-05 P1 (1) liquid liquid liquid 7.75587250e-05 4.13869268e-05 Both original halves agree 11100 RESOLVED
500/1 -8.988401 0.063353 493.205452 12.399303 -870.572282 0.00000019 up 6.69660888e-09 Ia-3 (206) solid solid solid 0.00000000e+00 1.05231158e-08 Both original halves agree 11100 RESOLVED
======================================================================================================================================================
Wrote summary.csv and summary.out for 12 trajectories
Wrote phase_pred.csv: {'solid': 7, 'liquid': 5}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
Wrote /data/qhong7/qhong7/sluschi_auto/f01743ec-3e2d-40f2-8605-397aed0f3f61/Sc16O24/Dir_lammps/cost_table.out
Collected 45 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 12
Total log files (incl. subruns) = 45
Total wall time = 4:20:47
Total seconds = 15647
Total GPU hours = 4.35
====================================
=== DFT corrections begin ===
=== PBE correction ===
PBE_METHOD = PBE
N rows with PBE energy = 8
MT_LMP = 2197.385806501859
STD_LMP = 107.5899628601141
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -8.72752859
PBE_energy_eV_per_atom = -8.70678028
N_solid_PBE = 4
SEM_lammps_solid_PBE = 1.17487701e-02 eV/atom
SEM_PBE_solid = 1.19485398e-02 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -8.43622609
PBE_energy_eV_per_atom = -8.41291573
N_liquid_PBE = 4
SEM_lammps_liquid_PBE = 4.86807397e-03 eV/atom
SEM_PBE_liquid = 5.89408839e-03 eV/atom
DH_LMP_raw_PBE = 0.29130250 eV/atom
DH_LMP_PBE = 0.29130250 eV/atom
DH_PBE = 0.29386455 eV/atom
STD_DH_LMP_PBE = 1.27173796e-02 eV/atom
STD_DH_PBE = 1.33232084e-02 eV/atom
COV_DH_PBE_LMP = 1.68652896e-04 (eV/atom)^2
DH_raw_PBE = 0.29386455 eV/atom
MT_PBE = 2216.71216046 K
STD_PBE = 109.01346943 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 8
MT_LMP = 2197.385806501859
STD_LMP = 107.5899628601141
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = -8.72752859
R2SCAN_energy_eV_per_atom = -11.63874849
N_solid_R2SCAN = 4
SEM_lammps_solid_R2SCAN = 1.17487701e-02 eV/atom
SEM_R2SCAN_solid = 1.33896651e-02 eV/atom
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = -8.43622609
R2SCAN_energy_eV_per_atom = -11.30188893
N_liquid_R2SCAN = 4
SEM_lammps_liquid_R2SCAN = 4.86807397e-03 eV/atom
SEM_R2SCAN_liquid = 6.30904043e-03 eV/atom
DH_LMP_raw_R2SCAN = 0.29130250 eV/atom
DH_LMP_R2SCAN = 0.29130250 eV/atom
DH_R2SCAN = 0.33685956 eV/atom
STD_DH_LMP_R2SCAN = 1.27173796e-02 eV/atom
STD_DH_R2SCAN = 1.48015919e-02 eV/atom
COV_DH_R2SCAN_LMP = 1.87557306e-04 (eV/atom)^2
DH_raw_R2SCAN = 0.33685956 eV/atom
MT_R2SCAN = 2541.03697819 K
STD_R2SCAN = 124.77732640 K
=== DFT corrections end ===
Sc16 O24 1.0 8.0530991699999994 0.0000000000000000 -2.8472008899999999 -4.0265495800000002 6.9741889500000003 -2.8472008899999999 -0.0000000000000000 -0.0000000000000000 8.5416016700000004 Sc O 16 24 direct 0.5000000000000000 0.5000000000000000 0.5000000000000000 Sc 0.0000000000000000 -0.0000000000000000 0.5000000000000000 Sc 0.5000000000000000 -0.0000000000000000 -0.0000000000000000 Sc 0.0000000000000000 0.5000000000000000 -0.0000000000000000 Sc 0.2500000000000000 0.2141544000000000 0.9641544000000000 Sc 0.2858456000000000 0.5358456000000000 0.7500000000000000 Sc 0.5358456000000000 0.7500000000000000 0.2858456000000000 Sc 0.2141544000000000 0.9641544000000000 0.2500000000000000 Sc 0.9641544000000000 0.2500000000000000 0.2141544000000000 Sc 0.7500000000000000 0.2858456000000000 0.5358456000000000 Sc 0.7500000000000000 0.7858456000000000 0.0358456000000000 Sc 0.7141544000000000 0.4641544000000000 0.2500000000000000 Sc 0.4641544000000000 0.2500000000000000 0.7141544000000000 Sc 0.7858456000000000 0.0358456000000000 0.7500000000000000 Sc 0.0358456000000000 0.7500000000000000 0.7858456000000000 Sc 0.2500000000000000 0.7141544000000000 0.4641544000000000 Sc 0.5357021400000000 0.7727242000000000 0.5461553800000000 O 0.9895467600000000 0.9538446200000000 0.7265688200000000 O 0.2629769400000000 0.7734311800000000 0.7272758000000000 O 0.5104532400000000 0.2370230600000000 0.9642978600000000 O 0.9538446200000000 0.7265688200000000 0.9895467600000000 O 0.7272758000000000 0.2629769400000000 0.7734311800000000 O 0.2370230600000000 0.9642978600000000 0.5104532400000000 O 0.5461553800000000 0.5357021400000000 0.7727242000000000 O 0.7727242000000000 0.5461553800000000 0.5357021400000000 O 0.7265688200000000 0.9895467600000000 0.9538446200000000 O 0.7734311800000000 0.7272758000000000 0.2629769400000000 O 0.9642978600000000 0.5104532400000000 0.2370230600000000 O 0.4642978600000000 0.2272758000000000 0.4538446200000000 O 0.0104532400000000 0.0461553800000000 0.2734311800000000 O 0.7370230600000000 0.2265688200000000 0.2727242000000000 O 0.4895467600000000 0.7629769400000000 0.0357021400000000 O 0.0461553800000000 0.2734311800000000 0.0104532400000000 O 0.2727242000000000 0.7370230600000000 0.2265688200000000 O 0.7629769400000000 0.0357021400000000 0.4895467600000000 O 0.4538446200000000 0.4642978600000000 0.2272758000000000 O 0.2272758000000000 0.4538446200000000 0.4642978600000000 O 0.2734311800000000 0.0104532400000000 0.0461553800000000 O 0.2265688200000000 0.2727242000000000 0.7370230600000000 O 0.0357021400000000 0.4895467600000000 0.7629769400000000 O
No output files have been received yet.