=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
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Generating solid with radius = 14
*** Generate a supercell from the current unitcell ***
The supercell is:
3.3328913800000000 5.8812680300000002 11.624864060000000
-0.23755283000000027 11.574272790000000 -5.7875663799999995
-13.560333340000000 5.8146499999999997E-002 3.8583775600000001
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
13.447 12.943 14.099 95.799 90.000 90.000
In UNIT-cell, number of atoms: 2 4 12 total: 18
Inverse Matrix is:
1.8430560387567012E-002 -9.0182482628912500E-003 -6.9056608733721297E-002
3.2522856469412144E-002 6.9838573974862303E-002 6.7700988454453478E-003
6.4284391137893096E-002 -3.2747267281253482E-002 1.6373646100167363E-002
In SUPER-cell, number of atoms: 16 32 96 total: 144
POSCAR_STRCT atoms = 144
Accepted radius = 14 with 144 atoms
====================================================================================================
/data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps
['Ba', 'Cl', 'O']
elements: ['Ba', 'Cl', 'O']
counts: [16, 32, 96]
solid atom IDs: 1:144
liquid atom IDs: 145:288
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500
Start running job (temp, id) 500 1000 ...
Using closest available scale or default: 1.0
==============================
Iteration 1
Current scale = 1.0
Pressure = 21656.306100
New scale = 1.01
==============================
Iteration 2
Current scale = 1.01
Pressure = 14407.745760
New scale = 1.02
==============================
Iteration 3
Current scale = 1.02
Pressure = 7940.243470
New scale = 1.03
==============================
Iteration 4
Current scale = 1.03
Pressure = 2927.349128
Converged!
Now running full trajectory...
Completed!
==============================
1000
Start running job (temp, id) 1000 1000 ...
Using closest available scale or default: 1.03
==============================
Iteration 1
Current scale = 1.03
Pressure = 19328.815800
New scale = 1.04
==============================
Iteration 2
Current scale = 1.04
Pressure = 16971.205010
New scale = 1.05
==============================
Iteration 3
Current scale = 1.05
Pressure = 10342.526290
New scale = 1.06
==============================
Iteration 4
Current scale = 1.06
Pressure = 4914.012050
Converged!
Now running full trajectory...
Completed!
==============================
1500
Start running job (temp, id) 1500 1000 ...
Using closest available scale or default: 1.06
==============================
Iteration 1
Current scale = 1.06
Pressure = 17494.199400
New scale = 1.07
==============================
Iteration 2
Current scale = 1.07
Pressure = 14339.703720
New scale = 1.08
==============================
Iteration 3
Current scale = 1.08
Pressure = 7572.589540
New scale = 1.09
==============================
Iteration 4
Current scale = 1.09
Pressure = 4945.111100
Converged!
Now running full trajectory...
Completed!
==============================
2000
Start running job (temp, id) 2000 1000 ...
Using closest available scale or default: 1.09
==============================
Iteration 1
Current scale = 1.09
Pressure = 14975.237080
New scale = 1.1
==============================
Iteration 2
Current scale = 1.1
Pressure = 11952.499260
New scale = 1.11
==============================
Iteration 3
Current scale = 1.11
Pressure = 10521.478370
New scale = 1.12
==============================
Iteration 4
Current scale = 1.12
Pressure = 10218.276800
New scale = 1.1300000000000001
==============================
Iteration 5
Current scale = 1.1300000000000001
Pressure = 5254.921150
New scale = 1.1400000000000001
Now running full trajectory...
Completed!
==============================
500, 500, 1
Adaptive temp step = 100
500
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/summary.out
Collected 4 folders
Wrote phase_pred.csv
Label counts:
solid = 1
liquid = 3
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 0 | 1 | 1
1500 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 507.78 K
Uncertainty = 8272.59 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 507.78007199999996 8273.3168774102633
500 1 0 1
1000 0 1 1
1500 0 1 1
2000 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 750.00000000000000 K
750, 750, 1
Adaptive temp step = 100
750
Start running job (temp, id) 750 1000 ...
Using closest available scale or default: 1.03
==============================
Iteration 1
Current scale = 1.03
Pressure = 10498.312570
New scale = 1.04
==============================
Iteration 2
Current scale = 1.04
Pressure = 4988.123370
Converged!
Now running full trajectory...
Completed!
==============================
=== DFT corrections begin ===
=== PBE correction ===
N rows with PBE energy = 8
MT_LMP = 811.9196207351123
STD_LMP = 34.0901956376131
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -4.55386111
PBE_energy_eV_per_atom = -4.53524630
N_solid_PBE = 4
SEM_lammps_solid_PBE = 3.86260490e-03 eV/atom
SEM_PBE_solid = 5.02752582e-03 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -4.50551771
PBE_energy_eV_per_atom = -4.48048292
N_liquid_PBE = 4
SEM_lammps_liquid_PBE = 2.49247417e-03 eV/atom
SEM_PBE_liquid = 2.32946347e-03 eV/atom
DH_LMP_raw_PBE = 0.04834340 eV/atom
DH_LMP_PBE = 0.04834340 eV/atom
DH_PBE = 0.05476338 eV/atom
STD_DH_LMP_PBE = 4.59697118e-03 eV/atom
STD_DH_PBE = 5.54097608e-03 eV/atom
COV_DH_PBE_LMP = 2.51135264e-05 (eV/atom)^2
DH_raw_PBE = 0.05476338 eV/atom
MT_PBE = 919.74214458 K
STD_PBE = 41.85180189 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 8
MT_LMP = 811.9196207351123
STD_LMP = 34.0901956376131
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = -4.55386111
R2SCAN_energy_eV_per_atom = -8.91276686
N_solid_R2SCAN = 4
SEM_lammps_solid_R2SCAN = 3.86260490e-03 eV/atom
SEM_R2SCAN_solid = 5.27297060e-03 eV/atom
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = -4.50551771
R2SCAN_energy_eV_per_atom = -8.84194518
N_liquid_R2SCAN = 4
SEM_lammps_liquid_R2SCAN = 2.49247417e-03 eV/atom
SEM_R2SCAN_liquid = 3.04835344e-03 eV/atom
DH_LMP_raw_R2SCAN = 0.04834340 eV/atom
DH_LMP_R2SCAN = 0.04834340 eV/atom
DH_R2SCAN = 0.07082168 eV/atom
STD_DH_LMP_R2SCAN = 4.59697118e-03 eV/atom
STD_DH_R2SCAN = 6.09070420e-03 eV/atom
COV_DH_R2SCAN_LMP = 2.74729241e-05 (eV/atom)^2
DH_raw_R2SCAN = 0.07082168 eV/atom
MT_R2SCAN = 1189.43864471 K
STD_R2SCAN = 55.18694218 K
=== DFT corrections end ===
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/summary.out
Collected 5 folders
Wrote phase_pred.csv
Label counts:
solid = 2
liquid = 3
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
750 | 1 | 0 | 1
1000 | 0 | 1 | 1
1500 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 759.09 K
Uncertainty = 8247.53 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 759.09489150000002 8243.3329445627496
500 1 0 1
750 1 0 1
1000 0 1 1
1500 0 1 1
2000 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 875.00000000000000 K
875, 875, 1
Adaptive temp step = 100
875
Start running job (temp, id) 875 1000 ...
Using closest available scale or default: 1.04
==============================
Iteration 1
Current scale = 1.04
Pressure = 9950.845620
New scale = 1.05
==============================
Iteration 2
Current scale = 1.05
Pressure = 5290.446510
New scale = 1.06
==============================
Iteration 3
Current scale = 1.06
Pressure = 2172.526070
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/summary.out
Collected 6 folders
Wrote phase_pred.csv
Label counts:
solid = 2
liquid = 4
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
750 | 1 | 0 | 1
875 | 0 | 1 | 1
1000 | 0 | 1 | 1
1500 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 758.85 K
Uncertainty = 3300.30 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 758.84672341199996 3295.1868654193618
500 1 0 1
750 1 0 1
875 0 1 1
1000 0 1 1
1500 0 1 1
2000 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 750.00000000000000 K
next job: 4 MD duplicate(s) at 875.00000000000000 K
750, 750, 4
Adaptive temp step = 100
750
Start running job (temp, id) 750 1100 ...
Using scale from current temperature folder: 1.04
==============================
Iteration 1
Current scale = 1.04
Pressure = 4700.885440
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 750 1200 ...
Using scale from current temperature folder: 1.04
==============================
Iteration 1
Current scale = 1.04
Pressure = 7871.925030
New scale = 1.05
==============================
Iteration 2
Current scale = 1.05
Pressure = 3340.565970
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 750 1300 ...
Using scale from current temperature folder: 1.05
==============================
Iteration 1
Current scale = 1.05
Pressure = 1221.443660
Converged!
Now running full trajectory...
Completed!
==============================
875, 875, 4
Adaptive temp step = 100
875
Start running job (temp, id) 875 1100 ...
Using scale from current temperature folder: 1.06
==============================
Iteration 1
Current scale = 1.06
Pressure = 925.079810
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 875 1200 ...
Using scale from current temperature folder: 1.06
==============================
Iteration 1
Current scale = 1.06
Pressure = 3689.755950
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 875 1300 ...
Using scale from current temperature folder: 1.06
==============================
Iteration 1
Current scale = 1.06
Pressure = 2397.454550
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/summary.out
Collected 12 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 7
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
750 | 4 | 0 | 4
875 | 0 | 4 | 4
1000 | 0 | 1 | 1
1500 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 811.87 K
Uncertainty = 34.20 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 811.88914578942615 34.047036296608127
500 1 0 1
750 4 0 4
875 0 4 4
1000 0 1 1
1500 0 1 1
2000 0 1 1
current fit
1 811.88914578942615 34.047036296608127
possibilities:
current fit
0 811.88914578942615 34.047036296608127
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg
------ ---------------- ---------------- ----------- ------------------- ------------ ------------ ---------- ------------------ ------
1000/1 -4.491609 0.127691 991.304342 23.201280 6773.363945 0.00000085 up 1.100e-05 P1 (1)
1500/1 -4.426257 0.193737 1504.035650 25.563659 10085.121080 -0.00000179 down 4.600e-05 P1 (1)
2000/1 -4.367201 0.254939 1979.169185 28.459370 9225.449765 -0.00000385 down 1.390e-04 P1 (1)
500/1 -4.607141 0.064428 500.173015 20.596298 1165.087100 -0.00000045 down 1.610e-06 P1 (1)
750/1 -4.558941 0.096086 745.941288 21.703450 852.770912 0.00000008 up 1.050e-06 P1 (1)
750/2 -4.551489 0.095823 743.900106 21.995778 2798.991425 0.00000150 up 5.880e-07 P1 (1)
750/3 -4.553641 0.095803 743.747876 22.211263 3746.176475 0.00000151 up 2.330e-06 P1 (1)
750/4 -4.558622 0.096467 748.898006 21.920677 1734.873261 0.00000018 up 1.550e-06 P1 (1)
875/1 -4.519424 0.110672 859.180456 22.372452 3552.598324 0.00000169 up 1.650e-05 P1 (1)
875/2 -4.517736 0.110238 855.808658 22.843307 3921.572927 0.00000168 up 1.050e-05 P1 (1)
875/3 -4.501576 0.112895 876.436142 23.164392 4574.681500 0.00000027 up 1.300e-05 P1 (1)
875/4 -4.511433 0.111786 867.831213 22.924573 4786.484065 0.00000239 up 8.490e-06 P1 (1)
======================================================================================================================================================
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/summary.out
Collected 12 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 7
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
750 | 4 | 0 | 4
875 | 0 | 4 | 4
1000 | 0 | 1 | 1
1500 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 811.92 K
Uncertainty = 34.09 K
====================================
Wrote /data/qhong7/qhong7/sluschi_auto/ece45505-b933-4bea-9a64-f82ad01f8b6a/Ba2Cl4O12/Dir_lammps/cost_table.out
Collected 41 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 12
Total log files (incl. subruns) = 41
Total wall time = 1:22:05
Total seconds = 4925
Total GPU hours = 1.37
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Ba2 Cl4 O12 1.0 6.7801666699999998 -0.0290732500000000 -1.9291887800000000 -3.5088597500000001 5.8016730200000000 -1.9291887999999999 0.0307922300000000 0.0543341300000000 7.7416208199999996 Ba Cl O 2 4 12 direct 0.0003030900000000 0.0003030900000000 0.0000000000000000 Ba 0.7503030900000000 0.2503030900000000 0.5000000000000000 Ba 0.6193240700000000 0.2208036700000000 0.9595609800000000 Cl 0.2612426900000000 0.6597630900000000 0.0404390200000000 Cl 0.9708036700000000 0.8693240700000000 0.4595609800000000 Cl 0.4097630900000000 0.5112426900000000 0.5404390200000000 Cl 0.7195744300000000 0.1550111700000000 0.1141615500000000 O 0.0408496200000000 0.6054128800000000 0.8858384500000001 O 0.9050111700000000 0.9695744300000000 0.6141615499999999 O 0.3554128800000000 0.2908496200000000 0.3858384500000000 O 0.8526793600000000 0.8970452200000000 0.2842805000000000 O 0.6127647200000000 0.5683988600000000 0.7157195000000000 O 0.6470452200000000 0.1026793600000000 0.7842805000000000 O 0.3183988600000000 0.8627647200000000 0.2157195000000000 O 0.3711311200000000 0.1110387600000000 0.9051068600000000 O 0.2059309000000000 0.4660242600000000 0.0948931400000000 O 0.8610387600000000 0.6211311200000000 0.4051068600000000 O 0.2160242600000000 0.4559309000000000 0.5948931400000000 O
No output files have been received yet.