| Method / sample set | ΔH | ΔS estimate |
|---|---|---|
| uMLIP (PBE sample set) |
0.421841 ± 0.0182 eV/atom
40.7015 ± 1.76 kJ/mol of atoms
|
0.000162337 ± 9.77e-06
eV/(atom K)
15.6632 ± 0.942 J/(mol of atoms K)
|
| PBE |
0.318692 ± 0.0172 eV/atom
30.7491 ± 1.66 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
15.6632 ± 0.942 J/(mol of atoms K)
|
| uMLIP (R2SCAN sample set) |
— eV/atom
— kJ/mol of atoms
|
—
eV/(atom K)
— J/(mol of atoms K)
|
| R2SCAN |
— eV/atom
— kJ/mol of atoms
|
—
eV/(atom K)
— J/(mol of atoms K)
|
ΔH is the liquid-minus-solid value reported by the existing correction workflow. Each uMLIP row uses the sample set matched to that DFT method. Uncertainties are standard errors; — means unavailable.
ΔS is estimated as ΔHuMLIP/Tm,uMLIP. Its propagated uncertainty assumes these two quantities are independent. The current PBE/R2SCAN correction inherits this entropy estimate; it is not an independently calculated DFT entropy.
| Sample set | Cp,solid | Cp,liquid |
|---|---|---|
| uMLIP (PBE sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
| uMLIP (R2SCAN sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
Values reported in SLUSCHI.out by the correction workflow. These are uMLIP potential-energy–temperature slopes for the PBE/R2SCAN sample sets, not full thermodynamic heat capacities or independent DFT heat capacities. The workflow may substitute the other phase's slope when one is unavailable. Uncertainties are not reported; — means unavailable.
| Vsolid [ų/atom] | Vliquid [ų/atom] | ΔV [ų/atom] |
|---|---|---|
| — | — | — |
=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 14
*** Generate a supercell from the current unitcell ***
The supercell is:
8.0888647799999998 5.7196925600000004 -10.507747620000000
-8.0888669200000010 11.439385200000000 0.0000000000000000
8.0888647799999998 5.7196925600000004 10.507747620000000
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
14.442 14.010 14.442 90.000 93.372 90.000
In UNIT-cell, number of atoms: 1 1 total: 2
Inverse Matrix is:
4.1208910493702990E-002 -4.1208910205513302E-002 4.1208910493702990E-002
2.9139100316488600E-002 5.8278185214828943E-002 2.9139100316488600E-002
-4.7583936927483993E-002 0.0000000000000000 4.7583936927483993E-002
In SUPER-cell, number of atoms: 96 96 total: 192
POSCAR_STRCT atoms = 192
Accepted radius = 14 with 192 atoms
====================================================================================================
/data/qhong7/qhong7/sluschi_auto/d31fb084-8f7a-4357-aa5a-59d317e14c23/NpN/Dir_lammps
['Np', 'N']
elements: ['Np', 'N']
counts: [96, 96]
solid atom IDs: 1:192
liquid atom IDs: 193:384
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 500/1, step_param=1000
Pressure trial 1: scale=1.0
Pressure = -19182.444
Pressure trial 2: scale=0.995
Pressure = -457.42797
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
500 K: 1/1 resolved; 1/13 attempts
1000 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 1000/1, step_param=1000
Pressure trial 1: scale=0.995
Pressure = 36217.8809
Pressure trial 2: scale=1.005
Pressure = 6021.926582
Pressure trial 3: scale=1.015
Pressure = -28315.0686
Pressure trial 4: scale=1.01
Pressure = -13456.46712
Pressure trial 5: scale=1.0050000000000001
Pressure = 1341.76304
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
1000 K: 1/1 resolved; 1/13 attempts
1500 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 1500/1, step_param=1000
Pressure trial 1: scale=1.0050000000000001
Pressure = 33935.5145
Pressure trial 2: scale=1.0150000000000001
Pressure = 1000.62398
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
1500 K: 1/1 resolved; 1/13 attempts
2000 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 2000/1, step_param=1000
Pressure trial 1: scale=1.0150000000000001
Pressure = 24188.85027
Pressure trial 2: scale=1.0250000000000001
Pressure = -114.397405
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
2000 K: 1/1 resolved; 1/13 attempts
500, 500, 1
Adaptive temp step = 100
500 K: 1/1 resolved; 1/13 attempts
Wrote summary.csv and summary.out for 4 trajectories
Wrote phase_pred.csv: {'solid': 4}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2044.9288524999999 6628.1537348418778
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2800.0 K
2800, 2800, 1
Adaptive temp step = 100
2800 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 2800/1, step_param=1000
Pressure trial 1: scale=1.0250000000000001
Pressure = 19672.047008
Pressure trial 2: scale=1.0350000000000001
Pressure = 2191.49215
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: liquid
2800 K: 1/1 resolved; 1/13 attempts
Wrote summary.csv and summary.out for 5 trajectories
Wrote phase_pred.csv: {'solid': 4, 'liquid': 1}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2050.4090095999995 10801.213104539556
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2400.0000000000000 K
2400, 2400, 1
Adaptive temp step = 100
2400 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 2400/1, step_param=1000
Pressure trial 1: scale=1.0250000000000001
Pressure = 10344.0838
Pressure trial 2: scale=1.0350000000000001
Pressure = -10565.270422
Pressure trial 3: scale=1.0300000000000002
Pressure = 3289.20131
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
2400 K: 1/1 resolved; 1/13 attempts
Wrote summary.csv and summary.out for 6 trajectories
Wrote phase_pred.csv: {'solid': 5, 'liquid': 1}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2452.1437833000000 10446.529821411732
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 2400.0000000000000 K
next job: 4 MD duplicate(s) at 2800.0000000000000 K
2400, 2400, 4
Adaptive temp step = 100
2400 K: 1/4 resolved; 1/16 attempts
Starting NEW trajectory 2400/2, step_param=1100
Pressure trial 1: scale=1.0300000000000002
Pressure = -877.850816
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
2400 K: 2/4 resolved; 2/16 attempts
Starting NEW trajectory 2400/3, step_param=1200
Pressure trial 1: scale=1.0300000000000002
Pressure = 3783.609
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
2400 K: 3/4 resolved; 3/16 attempts
Starting NEW trajectory 2400/4, step_param=1300
Pressure trial 1: scale=1.0300000000000002
Pressure = 6951.76536
Pressure trial 2: scale=1.0400000000000003
Pressure = -13735.71822
Pressure trial 3: scale=1.0350000000000004
Pressure = -3540.443
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
2400 K: 4/4 resolved; 4/16 attempts
2800, 2800, 4
Adaptive temp step = 100
2800 K: 1/4 resolved; 1/16 attempts
Starting NEW trajectory 2800/2, step_param=1100
Pressure trial 1: scale=1.0350000000000001
Pressure = 6542.14106
Pressure trial 2: scale=1.0450000000000002
Pressure = -9948.164153
Pressure trial 3: scale=1.0400000000000003
Pressure = -3675.0844
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: liquid
2800 K: 2/4 resolved; 2/16 attempts
Starting NEW trajectory 2800/3, step_param=1200
Pressure trial 1: scale=1.0400000000000003
Pressure = -8418.76308
Pressure trial 2: scale=1.0350000000000004
Pressure = 3736.60218
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: liquid
2800 K: 3/4 resolved; 3/16 attempts
Starting NEW trajectory 2800/4, step_param=1300
Pressure trial 1: scale=1.0350000000000004
Pressure = 5928.32065
Pressure trial 2: scale=1.0450000000000004
Pressure = -8049.84844
Pressure trial 3: scale=1.0400000000000005
Pressure = -2619.74532
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: liquid
2800 K: 4/4 resolved; 4/16 attempts
Wrote summary.csv and summary.out for 12 trajectories
Wrote phase_pred.csv: {'solid': 8, 'liquid': 4}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2598.5502901670279 108.70782043233264
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 4 0 4
2800 0 4 4
current fit
1 2598.5502901670279 108.70782043233264
possibilities:
current fit
0 2598.5502901670279 108.70782043233264
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg phase left_phase right_phase left_D [cm^2/s] right_D [cm^2/s] phase_reason last_md_step phase_check
1000/1 -11.574719 0.129308 1002.978572 14.938684 372.745501 -0.00000028 down 2.81147820e-08 P1 (1) solid solid solid 4.78471673e-08 8.38239661e-09 Both original halves agree 11100 RESOLVED
1500/1 -11.524815 0.193077 1497.609270 14.978904 12569.375500 -0.00001510 down 0.00000000e+00 P1 (1) solid solid solid 7.71866337e-08 0.00000000e+00 Both original halves agree 11100 RESOLVED
2000/1 -11.447390 0.258419 2004.437275 15.518012 -2001.902563 -0.00001025 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 21100 RESOLVED
2400/1 -11.374605 0.309585 2401.310450 15.712923 3298.330549 -0.00000906 down 4.21784772e-07 P1 (1) solid solid solid 6.42949274e-07 0.00000000e+00 Both original halves agree 41100 RESOLVED
2400/2 -11.376371 0.312400 2423.138005 15.698002 4752.339492 -0.00000958 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 31200 RESOLVED
2400/3 -11.371911 0.310489 2408.322400 15.740804 1607.200404 -0.00000903 down 1.47991716e-07 P1 (1) solid solid solid 2.77846842e-09 2.93204963e-07 Both original halves agree 31300 RESOLVED
2400/4 -11.369419 0.306065 2374.001400 15.679970 5436.671530 -0.00000805 down 9.09348093e-07 P1 (1) solid solid solid 1.15492795e-07 1.70320339e-06 Both original halves agree 41400 RESOLVED
2800/1 -10.959495 0.357582 2773.595015 17.274027 5695.096658 0.00001554 up 5.31269469e-05 P1 (1) liquid liquid liquid 3.27547980e-05 7.34990958e-05 Both original halves agree 11100 RESOLVED
2800/2 -10.963549 0.360108 2793.187985 17.201129 8160.402802 0.00001677 up 7.55367548e-05 P1 (1) liquid liquid liquid 5.36148550e-05 9.39071024e-05 Both original halves agree 11200 RESOLVED
2800/3 -10.955195 0.358449 2780.320600 17.235278 8002.233009 0.00002374 up 5.10204127e-05 P1 (1) liquid liquid liquid 4.12827510e-05 6.07580743e-05 Both original halves agree 11300 RESOLVED
2800/4 -10.921761 0.359466 2788.213195 17.859041 -1775.957655 0.00000878 up 6.47266506e-05 P1 (1) liquid liquid liquid 6.51014835e-05 6.43518177e-05 Both original halves agree 21400 RESOLVED
500/1 -11.688041 0.063981 496.273494 14.566802 1667.430301 0.00000009 up 4.62234711e-08 P1 (1) solid solid solid 5.30221410e-08 3.27860783e-08 Both original halves agree 11100 RESOLVED
======================================================================================================================================================
Wrote summary.csv and summary.out for 12 trajectories
Wrote phase_pred.csv: {'solid': 8, 'liquid': 4}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
INCOMPLETE: 2600 K: 0/4 resolved trajectories
NEEDS REVIEW: Resolved targets were not met after the scheduler returned.
Do not wait on capped trajectories or refit unchanged results.
Wrote /data/qhong7/qhong7/sluschi_auto/d31fb084-8f7a-4357-aa5a-59d317e14c23/NpN/Dir_lammps/cost_table.out
Collected 41 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 12
Total log files (incl. subruns) = 41
Total wall time = 2:29:17
Total seconds = 8957
Total GPU hours = 2.49
====================================
=== DFT corrections begin ===
=== PBE correction ===
N rows with PBE energy = 7
MT_LMP = 2598.550290167028
STD_LMP = 108.70782043233264
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -11.36813893
PBE_energy_eV_per_atom = -11.18271021
N_solid_PBE = 4
SEM_lammps_solid_PBE = 6.51978455e-03 eV/atom
SEM_PBE_solid = 4.78176783e-03 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -10.94629757
PBE_energy_eV_per_atom = -10.86401827
N_liquid_PBE = 3
SEM_lammps_liquid_PBE = 1.70330496e-02 eV/atom
SEM_PBE_liquid = 1.64924805e-02 eV/atom
DH_LMP_raw_PBE = 0.42184136 eV/atom
DH_LMP_PBE = 0.42184136 eV/atom
DH_PBE = 0.31869194 eV/atom
STD_DH_LMP_PBE = 1.82382117e-02 eV/atom
STD_DH_PBE = 1.71716981e-02 eV/atom
COV_DH_PBE_LMP = 3.11186063e-04 (eV/atom)^2
DH_raw_PBE = 0.31869194 eV/atom
MT_PBE = 1963.14803161 K
STD_PBE = 85.41667158 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 0
MT_LMP = 2598.550290167028
STD_LMP = 108.70782043233264
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = N/A
R2SCAN_energy_eV_per_atom = N/A
N_solid_R2SCAN = 0
SEM_lammps_solid_R2SCAN = N/A
SEM_R2SCAN_solid = N/A
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = N/A
R2SCAN_energy_eV_per_atom = N/A
N_liquid_R2SCAN = 0
SEM_lammps_liquid_R2SCAN = N/A
SEM_R2SCAN_liquid = N/A
DH_LMP_raw_R2SCAN = N/A
DH_LMP_R2SCAN = N/A
DH_R2SCAN = N/A
STD_DH_LMP_R2SCAN = N/A
STD_DH_R2SCAN = N/A
COV_DH_R2SCAN_LMP = N/A
MT_R2SCAN = N/A
STD_R2SCAN = N/A
=== DFT corrections end ===
Np1 N1 1.0 3.0333245600000001 -0.0000000100000000 1.7512912700000001 1.0111078300000000 2.8598462900000001 1.7512912700000001 -0.0000000000000000 -0.0000000000000000 3.5025825400000001 Np N 1 1 direct 0.5000000000000000 0.5000000000000000 0.5000000000000000 Np 0.0000000000000000 -0.0000000000000000 -0.0000000000000000 N
No output files have been received yet.