=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
-2.1387339999999995 -6.5248230000000005 8.8321559999999995
-4.3664310000000004 8.8681479999999997 4.5258560000000001
-10.838013000000000 -2.2099760000000002 -4.4678780000000007
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
11.187 10.872 11.929 86.683 90.799 94.032
In UNIT-cell, number of atoms: 4 4 total: 8
Inverse Matrix is:
-2.0500890108437208E-002 -3.3686896177305012E-002 -7.4650449444234435E-002
-4.7452777072599941E-002 7.2867057670258639E-002 -1.9992604896360171E-002
7.3202180536400055E-002 4.5673711336208032E-002 -3.2846528367405273E-002
In SUPER-cell, number of atoms: 68 68 total: 136
POSCAR_STRCT atoms = 136
Accepted radius = 11 with 136 atoms
====================================================================================================
/projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps
['Fe', 'O']
elements: ['Fe', 'O']
counts: [68, 68]
solid atom IDs: 1:136
liquid atom IDs: 137:272
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500
Start running job (temp, id) 500 1000 ...
Using closest available scale or default: 1.0
==============================
Iteration 1
Current scale = 1.0
Pressure = 17888.605200
New scale = 1.01
==============================
Iteration 2
Current scale = 1.01
Pressure = -28807.074100
Step reduced to 0.005
New scale = 1.0050000000000001
==============================
Iteration 3
Current scale = 1.0050000000000001
Pressure = -5965.025690
New scale = 1.0000000000000002
==============================
Iteration 4
Current scale = 1.0000000000000002
Pressure = 17888.605200
Step reduced to 0.0025
New scale = 1.0025000000000002
==============================
Iteration 5
Current scale = 1.0025000000000002
Pressure = 5842.926320
New scale = 1.0050000000000001
Now running full trajectory...
Completed!
==============================
1000
Start running job (temp, id) 1000 1000 ...
Using closest available scale or default: 1.0050000000000001
==============================
Iteration 1
Current scale = 1.0050000000000001
Pressure = 24237.040200
New scale = 1.0150000000000001
==============================
Iteration 2
Current scale = 1.0150000000000001
Pressure = -17091.199150
Step reduced to 0.005
New scale = 1.0100000000000002
==============================
Iteration 3
Current scale = 1.0100000000000002
Pressure = 3010.081317
Converged!
Now running full trajectory...
Completed!
==============================
1500
Start running job (temp, id) 1500 1000 ...
Using closest available scale or default: 1.0100000000000002
==============================
Iteration 1
Current scale = 1.0100000000000002
Pressure = 76361.502800
New scale = 1.0200000000000002
==============================
Iteration 2
Current scale = 1.0200000000000002
Pressure = 47271.008300
New scale = 1.0300000000000002
==============================
Iteration 3
Current scale = 1.0300000000000002
Pressure = 21331.100840
New scale = 1.0400000000000003
==============================
Iteration 4
Current scale = 1.0400000000000003
Pressure = 2681.259840
Converged!
Now running full trajectory...
Completed!
==============================
2000
Start running job (temp, id) 2000 1000 ...
Using closest available scale or default: 1.0400000000000003
==============================
Iteration 1
Current scale = 1.0400000000000003
Pressure = 33384.052000
New scale = 1.0500000000000003
==============================
Iteration 2
Current scale = 1.0500000000000003
Pressure = 16544.138900
New scale = 1.0600000000000003
==============================
Iteration 3
Current scale = 1.0600000000000003
Pressure = 4422.581380
Converged!
Now running full trajectory...
Completed!
==============================
500, 500, 1
Adaptive temp step = 100
500
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.csv
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.out
Collected 4 folders
Wrote phase_pred.csv
Label counts:
solid = 3
liquid = 1
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 1514.74 K
Uncertainty = 7250.58 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 1514.7393730000001 7262.8055805805861
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 1750.0000000000000 K
1750, 1750, 1
Adaptive temp step = 100
1750
Start running job (temp, id) 1750 1000 ...
Using closest available scale or default: 1.0600000000000003
==============================
Iteration 1
Current scale = 1.0600000000000003
Pressure = -18997.270730
Step reduced to 0.005
New scale = 1.0550000000000004
==============================
Iteration 2
Current scale = 1.0550000000000004
Pressure = -15359.467782
New scale = 1.0500000000000005
==============================
Iteration 3
Current scale = 1.0500000000000005
Pressure = -4151.475420
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.csv
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.out
Collected 5 folders
Wrote phase_pred.csv
Label counts:
solid = 4
liquid = 1
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
1750 | 1 | 0 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 1771.86 K
Uncertainty = 6974.67 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 1771.8571099999999 6953.2628096299404
500 1 0 1
1000 1 0 1
1500 1 0 1
1750 1 0 1
2000 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 1875.0000000000000 K
1875, 1875, 1
Adaptive temp step = 100
1875
Start running job (temp, id) 1875 1000 ...
Using closest available scale or default: 1.0600000000000003
==============================
Iteration 1
Current scale = 1.0600000000000003
Pressure = -3496.994050
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.csv
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.out
Collected 6 folders
Wrote phase_pred.csv
Label counts:
solid = 4
liquid = 2
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
1750 | 1 | 0 | 1
1875 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 1793.55 K
Uncertainty = 6985.19 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 1793.5516874999998 6983.9987892391900
500 1 0 1
1000 1 0 1
1500 1 0 1
1750 1 0 1
1875 0 1 1
2000 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 1750.0000000000000 K
next job: 4 MD duplicate(s) at 1875.0000000000000 K
1750, 1750, 4
Adaptive temp step = 100
1750
Start running job (temp, id) 1750 1100 ...
Using scale from current temperature folder: 1.0500000000000005
==============================
Iteration 1
Current scale = 1.0500000000000005
Pressure = -9997.314390
Step reduced to 0.005
New scale = 1.0450000000000006
==============================
Iteration 2
Current scale = 1.0450000000000006
Pressure = 1271.999129
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 1750 1200 ...
Using scale from current temperature folder: 1.0450000000000006
==============================
Iteration 1
Current scale = 1.0450000000000006
Pressure = 6384.781510
New scale = 1.0550000000000006
==============================
Iteration 2
Current scale = 1.0550000000000006
Pressure = -2249.048000
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 1750 1300 ...
Using scale from current temperature folder: 1.0550000000000006
==============================
Iteration 1
Current scale = 1.0550000000000006
Pressure = -5057.123850
Step reduced to 0.005
New scale = 1.0500000000000007
==============================
Iteration 2
Current scale = 1.0500000000000007
Pressure = -514.248878
Converged!
Now running full trajectory...
Completed!
==============================
1875, 1875, 4
Adaptive temp step = 100
1875
Start running job (temp, id) 1875 1100 ...
Using scale from current temperature folder: 1.0600000000000003
==============================
Iteration 1
Current scale = 1.0600000000000003
Pressure = -6120.480510
Step reduced to 0.005
New scale = 1.0550000000000004
==============================
Iteration 2
Current scale = 1.0550000000000004
Pressure = 2102.436980
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 1875 1200 ...
Using scale from current temperature folder: 1.0550000000000004
==============================
Iteration 1
Current scale = 1.0550000000000004
Pressure = 5382.752600
New scale = 1.0650000000000004
==============================
Iteration 2
Current scale = 1.0650000000000004
Pressure = -11377.134620
Step reduced to 0.005
New scale = 1.0600000000000005
==============================
Iteration 3
Current scale = 1.0600000000000005
Pressure = -3870.714420
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 1875 1300 ...
Using scale from current temperature folder: 1.0600000000000005
==============================
Iteration 1
Current scale = 1.0600000000000005
Pressure = -1354.906410
Converged!
Now running full trajectory...
/projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps
['Fe', 'O']
elements: ['Fe', 'O']
counts: [68, 68]
solid atom IDs: 1:136
liquid atom IDs: 137:272
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500
1000
1500
2000
500, 500, 1
Adaptive temp step = 100
500
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.csv
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.out
Collected 11 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 3
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
1750 | 4 | 0 | 4
1875 | 1 | 2 | 3
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 1874.10 K
Uncertainty = 6096.04 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 1874.0992447305002 6101.3754326373255
500 1 0 1
1000 1 0 1
1500 1 0 1
1750 4 0 4
1875 1 2 3
2000 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 1750.0000000000000 K
next job: 4 MD duplicate(s) at 1875.0000000000000 K
next job: 4 MD duplicate(s) at 1875.0000000000000 K
next job: 4 MD duplicate(s) at 2000.0000000000000 K
next job: 4 MD duplicate(s) at 1750.0000000000000 K
next job: 4 MD duplicate(s) at 1875.0000000000000 K
1750, 1750, 4
Adaptive temp step = 100
1750
1875, 1875, 4
Adaptive temp step = 100
1875
Start running job (temp, id) 1875 1300 ...
Using scale from current temperature folder: 1.0600000000000005
==============================
Iteration 1
Current scale = 1.0600000000000005
Pressure = 4560.253840
Converged!
Now running full trajectory...
Completed!
==============================
1875, 1875, 4
Adaptive temp step = 100
1875
2000, 2000, 4
Adaptive temp step = 100
2000
Start running job (temp, id) 2000 1100 ...
Using scale from current temperature folder: 1.0600000000000003
==============================
Iteration 1
Current scale = 1.0600000000000003
Pressure = -1686.909870
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2000 1200 ...
Using scale from current temperature folder: 1.0600000000000003
==============================
Iteration 1
Current scale = 1.0600000000000003
Pressure = 7689.880982
New scale = 1.0700000000000003
==============================
Iteration 2
Current scale = 1.0700000000000003
Pressure = -3510.730350
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2000 1300 ...
Using scale from current temperature folder: 1.0700000000000003
==============================
Iteration 1
Current scale = 1.0700000000000003
Pressure = -10896.241100
Step reduced to 0.005
New scale = 1.0650000000000004
==============================
Iteration 2
Current scale = 1.0650000000000004
Pressure = -3805.234916
Converged!
Now running full trajectory...
Completed!
==============================
1750, 1750, 4
Adaptive temp step = 100
1750
1875, 1875, 4
Adaptive temp step = 100
1875
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.csv
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.out
Collected 15 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 7
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
1750 | 4 | 0 | 4
1875 | 1 | 3 | 4
2000 | 0 | 4 | 4
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 1849.14 K
Uncertainty = 36.94 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 1848.9867460062155 36.954786834557432
500 1 0 1
1000 1 0 1
1500 1 0 1
1750 4 0 4
1875 1 3 4
2000 0 4 4
current fit
1 1848.9867460062155 36.954786834557432
possibilities:
current fit
0 1848.9867460062155 36.954786834557432
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg
------ ---------------- ---------------- ----------- ------------------- ------------ ------------ ---------- ------------------ ---
1000/1 -6.493160 0.128763 999.828360 11.236460 4595.411641 -0.00000128 down 7.450e-08
1500/1 -6.371261 0.195106 1514.974015 11.863582 6936.390894 -0.00000415 down 1.040e-06
1750/1 -6.304010 0.225858 1753.760600 12.447307 -7477.292390 -0.00000692 down 1.290e-06
1750/2 -6.325511 0.228231 1772.185045 12.203449 664.179513 -0.00000540 down 6.020e-07
1750/3 -6.314213 0.226440 1758.282625 12.275173 -3972.575453 -0.00000942 down 9.130e-07
1750/4 -6.305466 0.228444 1773.839760 12.413485 -7504.059860 -0.00000881 down 1.410e-06
1875/1 -6.142518 0.242659 1884.222200 14.399584 8144.061250 0.00000478 up 3.510e-05
1875/2 -6.282774 0.243682 1892.158885 12.501796 -2681.315108 -0.00000756 down 1.500e-06
1875/3 -6.158049 0.241860 1878.016305 13.609069 26433.269650 0.00001006 up 4.160e-05
1875/4 -6.147856 0.239311 1858.225435 14.166199 13459.427805 0.00000669 up 3.360e-05
2000/1 -6.119838 0.255742 1985.806905 14.305429 12925.038677 0.00000701 up 4.830e-05
2000/2 -6.110880 0.254969 1979.805605 14.742593 7304.999489 0.00000452 up 4.350e-05
2000/3 -6.121726 0.257241 1997.449165 14.413493 16240.504400 0.00000459 up 6.890e-05
2000/4 -6.127256 0.259589 2015.674915 14.177237 14000.610877 0.00000512 up 5.560e-05
500/1 -6.557191 0.064517 500.969169 11.125002 1173.437346 -0.00000002 down 4.330e-09
======================================================================================================================================================
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.csv
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/summary.out
Collected 15 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 7
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
1750 | 4 | 0 | 4
1875 | 1 | 3 | 4
2000 | 0 | 4 | 4
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 1849.25 K
Uncertainty = 37.15 K
====================================
Wrote /projects/bhin/hqj/sluschi_auto/b01d7bd7-476f-4a1e-9f90-1689c295cae1/Fe4O4/Dir_lammps/cost_table.out
Collected 51 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 15
Total log files (incl. subruns) = 51
Total wall time = 46:43:50
Total seconds = 168230
Total GPU hours = 46.73
====================================
=== PBE correction ===
N rows with PBE energy = 8
MT_LMP = 1849.25327443279
STD_LMP = 37.145751600905655
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -6.31395662
PBE_energy_eV_per_atom = -6.68007227
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -6.14608125
PBE_energy_eV_per_atom = -6.68940670
DH_LMP_raw_PBE = 0.16787537 eV/atom
DH_LMP_PBE = 0.14621862 eV/atom
DH_PBE = -0.03099117 eV/atom
Cp_solid_PBE = 2.03143738e-04 eV/atom/K
Cp_liquid_PBE = 2.29991176e-04 eV/atom/K
Cp_avg_PBE = 2.16567457e-04 eV/atom/K
DeltaT_PBE = 100.00 K
DH_raw_PBE = -0.00933443 eV/atom
MT_PBE = -391.95096846 K
Fe4 O4 1.0 2.1766480000000001 -2.2104390000000000 -0.0197360000000000 2.1576909999999998 2.1571920000000002 -4.4259459999999997 2.1635130000000000 2.2368310000000000 4.4666480000000002 Fe O 4 4 direct 0.5000000000000000 0.0000000000000000 0.5000000000000000 Fe 0.0000000000000000 0.5000000000000000 0.5000000000000000 Fe 0.0000000000000000 0.0000000000000000 0.0000000000000000 Fe 0.5000010000000000 0.5000000000000000 0.0000000000000000 Fe 0.9682910000000000 0.2516760000000000 0.7420660000000000 O 0.4683130000000000 0.2516730000000000 0.2420680000000000 O 0.0317090000000000 0.7483240000000000 0.2579340000000000 O 0.5316860000000000 0.7483270000000000 0.7579320000000001 O
No output files have been received yet.