| Method / sample set | ΔH | ΔS estimate |
|---|---|---|
| uMLIP (PBE sample set) |
0.374279 ± 0.00946 eV/atom
36.1124 ± 0.912 kJ/mol of atoms
|
0.000144042 ± 7.05e-06
eV/(atom K)
13.898 ± 0.68 J/(mol of atoms K)
|
| PBE |
0.259519 ± 0.0125 eV/atom
25.0398 ± 1.2 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
13.898 ± 0.68 J/(mol of atoms K)
|
| uMLIP (R2SCAN sample set) |
— eV/atom
— kJ/mol of atoms
|
—
eV/(atom K)
— J/(mol of atoms K)
|
| R2SCAN |
— eV/atom
— kJ/mol of atoms
|
—
eV/(atom K)
— J/(mol of atoms K)
|
ΔH is the liquid-minus-solid value reported by the existing correction workflow. Each uMLIP row uses the sample set matched to that DFT method. Uncertainties are standard errors; — means unavailable.
ΔS is estimated as ΔHuMLIP/Tm,uMLIP. Its propagated uncertainty assumes these two quantities are independent. The current PBE/R2SCAN correction inherits this entropy estimate; it is not an independently calculated DFT entropy.
| Sample set | Cp,solid | Cp,liquid |
|---|---|---|
| uMLIP (PBE sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
| uMLIP (R2SCAN sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
Values reported in SLUSCHI.out by the correction workflow. These are uMLIP potential-energy–temperature slopes for the PBE/R2SCAN sample sets, not full thermodynamic heat capacities or independent DFT heat capacities. The workflow may substitute the other phase's slope when one is unavailable. Uncertainties are not reported; — means unavailable.
| Vsolid [ų/atom] | Vliquid [ų/atom] | ΔV [ų/atom] |
|---|---|---|
| — | — | — |
=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 14
*** Generate a supercell from the current unitcell ***
The supercell is:
-4.0000000000000001E-008 -4.0000000000000001E-008 -13.996394040000000
-14.141437520000000 2.8570012399999998 -2.0999999996718088E-006
2.0202071600000009 14.285006319999999 2.0999999996718088E-006
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
13.996 14.427 14.427 86.628 90.000 90.000
In UNIT-cell, number of atoms: 1 1 total: 2
Inverse Matrix is:
1.2378167445937386E-008 -6.8749884657173563E-002 1.3749976815929215E-002
8.7526865521263331E-009 9.7227124806477418E-003 6.8058926724130886E-002
-7.1446973923577892E-002 1.6869251325115112E-010 -2.3379994391772668E-010
In SUPER-cell, number of atoms: 96 96 total: 192
POSCAR_STRCT atoms = 192
Accepted radius = 14 with 192 atoms
====================================================================================================
/data/qhong7/qhong7/sluschi_auto/98165ca6-ed4d-4578-94fd-48d316ad16b6/PuN/Dir_lammps
['Pu', 'N']
elements: ['Pu', 'N']
counts: [96, 96]
solid atom IDs: 1:192
liquid atom IDs: 193:384
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 500/1, step_param=1000
Pressure trial 1: scale=1.0
Pressure = 291.26393
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
500 K: 1/1 resolved; 1/13 attempts
1000 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 1000/1, step_param=1000
Pressure trial 1: scale=1.0
Pressure = 24021.5241
Pressure trial 2: scale=1.01
Pressure = -11860.33223
Pressure trial 3: scale=1.0050000000000001
Pressure = 4906.198601
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
1000 K: 1/1 resolved; 1/13 attempts
1500 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 1500/1, step_param=1000
Pressure trial 1: scale=1.0050000000000001
Pressure = 54195.8082
Pressure trial 2: scale=1.0150000000000001
Pressure = 24277.2647
Pressure trial 3: scale=1.0250000000000001
Pressure = 8634.63959
Pressure trial 4: scale=1.0350000000000001
Pressure = -6467.81531
Pressure trial 5: scale=1.0300000000000002
Pressure = -4676.17978
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
1500 K: 1/1 resolved; 1/13 attempts
2000 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 2000/1, step_param=1000
Pressure trial 1: scale=1.0300000000000002
Pressure = 16371.09105
Pressure trial 2: scale=1.0400000000000003
Pressure = 253.88408
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
2000 K: 1/1 resolved; 1/13 attempts
500, 500, 1
Adaptive temp step = 100
500 K: 1/1 resolved; 1/13 attempts
Wrote summary.csv and summary.out for 4 trajectories
Wrote phase_pred.csv: {'solid': 4}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2044.9288524999999 6616.1963311443515
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2800.0 K
2800, 2800, 1
Adaptive temp step = 100
2800 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 2800/1, step_param=1000
Pressure trial 1: scale=1.0400000000000003
Pressure = 16405.73625
Pressure trial 2: scale=1.0500000000000003
Pressure = -2226.02083
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: liquid
2800 K: 1/1 resolved; 1/13 attempts
Wrote summary.csv and summary.out for 5 trajectories
Wrote phase_pred.csv: {'solid': 4, 'liquid': 1}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2050.4090095999995 10812.370799286371
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2400.0000000000000 K
2400, 2400, 1
Adaptive temp step = 100
2400 K: 0/1 resolved; 0/13 attempts
Starting NEW trajectory 2400/1, step_param=1000
Pressure trial 1: scale=1.0400000000000003
Pressure = 6477.58021
Pressure trial 2: scale=1.0500000000000003
Pressure = -4643.908494
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
2400 K: 1/1 resolved; 1/13 attempts
Wrote summary.csv and summary.out for 6 trajectories
Wrote phase_pred.csv: {'solid': 5, 'liquid': 1}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2452.1437833000000 10436.468494472503
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 2400.0000000000000 K
next job: 4 MD duplicate(s) at 2800.0000000000000 K
2400, 2400, 4
Adaptive temp step = 100
2400 K: 1/4 resolved; 1/16 attempts
Starting NEW trajectory 2400/2, step_param=1100
Pressure trial 1: scale=1.0500000000000003
Pressure = -2113.150266
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
2400 K: 2/4 resolved; 2/16 attempts
Starting NEW trajectory 2400/3, step_param=1200
Pressure trial 1: scale=1.0500000000000003
Pressure = -10771.28062
Pressure trial 2: scale=1.0450000000000004
Pressure = 5978.64328
Pressure trial 3: scale=1.0475000000000003
Pressure = -102.03384
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
2400 K: 3/4 resolved; 3/16 attempts
Starting NEW trajectory 2400/4, step_param=1300
Pressure trial 1: scale=1.0475000000000003
Pressure = -6012.68612
Pressure trial 2: scale=1.0425000000000004
Pressure = 4424.57172
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: solid
2400 K: 4/4 resolved; 4/16 attempts
2800, 2800, 4
Adaptive temp step = 100
2800 K: 1/4 resolved; 1/16 attempts
Starting NEW trajectory 2800/2, step_param=1100
Pressure trial 1: scale=1.0500000000000003
Pressure = 5170.8254
Pressure trial 2: scale=1.0600000000000003
Pressure = -5592.43811
Pressure trial 3: scale=1.0550000000000004
Pressure = -3879.633643
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: liquid
2800 K: 2/4 resolved; 2/16 attempts
Starting NEW trajectory 2800/3, step_param=1200
Pressure trial 1: scale=1.0550000000000004
Pressure = 1298.66095
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: liquid
2800 K: 3/4 resolved; 3/16 attempts
Starting NEW trajectory 2800/4, step_param=1300
Pressure trial 1: scale=1.0550000000000004
Pressure = 479.17353
Production: at most 20 blocks of 10000 steps, including the first
Completed! Phase: liquid
2800 K: 4/4 resolved; 4/16 attempts
Wrote summary.csv and summary.out for 12 trajectories
Wrote phase_pred.csv: {'solid': 8, 'liquid': 4}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 2598.3962995813949 108.91217540833678
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 4 0 4
2800 0 4 4
current fit
1 2598.3962995813949 108.91217540833678
possibilities:
current fit
0 2598.3962995813949 108.91217540833678
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg phase left_phase right_phase left_D [cm^2/s] right_D [cm^2/s] phase_reason last_md_step phase_check
1000/1 -12.450158 0.129095 1001.330224 15.574226 1745.847604 -0.00000031 down 4.37457639e-08 solid solid solid 7.20664992e-08 1.54250287e-08 Both original halves agree 11100 RESOLVED
1500/1 -12.364662 0.195039 1512.829705 15.620976 22101.915200 -0.00000860 down 1.84123612e-07 P1 (1) solid solid solid 1.75062800e-07 1.93184424e-07 Both original halves agree 11100 RESOLVED
2000/1 -12.251186 0.262094 2032.940595 16.618136 -12463.781765 -0.00002493 down 2.70937143e-07 P1 (1) solid solid solid 0.00000000e+00 5.47807659e-07 Both original halves agree 11100 RESOLVED
2400/1 -12.220936 0.312228 2421.807530 16.402625 11188.616840 -0.00001494 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 21100 RESOLVED
2400/2 -12.205376 0.310441 2407.945950 16.426156 12485.795100 -0.00001335 down 1.18325677e-06 P1 (1) solid solid solid 1.71249749e-07 2.19526380e-06 Both original halves agree 21200 RESOLVED
2400/3 -12.208826 0.308954 2396.411675 16.401840 12604.985505 -0.00001381 down 4.40765911e-08 P1 (1) solid solid solid 0.00000000e+00 2.08578299e-07 Both original halves agree 21300 RESOLVED
2400/4 -12.191064 0.312125 2421.008965 16.626419 5208.015347 -0.00001170 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 21400 RESOLVED
2800/1 -11.848560 0.362887 2814.743205 18.677969 11506.601415 0.00001630 up 4.18804589e-05 P1 (1) liquid liquid liquid 3.49193997e-05 4.88415180e-05 Both original halves agree 11100 RESOLVED
2800/2 -11.831554 0.356762 2767.237035 18.690703 14135.141730 0.00001808 up 3.49061078e-05 P1 (1) liquid liquid liquid 2.31970910e-05 4.66151245e-05 Both original halves agree 11200 RESOLVED
2800/3 -11.829957 0.359387 2787.596225 19.003551 8059.677190 0.00000933 up 7.22791816e-05 P1 (1) liquid liquid liquid 7.67720534e-05 6.77863097e-05 Both original halves agree 11300 RESOLVED
2800/4 -11.804330 0.359112 2785.462055 19.930935 -3295.211525 0.00000716 up 5.74814635e-05 P1 (1) liquid liquid liquid 6.35490737e-05 5.14138533e-05 Both original halves agree 21400 RESOLVED
500/1 -12.519157 0.064664 501.565470 15.312191 589.967700 0.00000006 up 1.94666030e-09 P1 (1) solid solid solid 0.00000000e+00 1.79656925e-08 Both original halves agree 11100 RESOLVED
======================================================================================================================================================
Wrote summary.csv and summary.out for 12 trajectories
Wrote phase_pred.csv: {'solid': 8, 'liquid': 4}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
INCOMPLETE: 2600 K: 0/4 resolved trajectories
NEEDS REVIEW: Resolved targets were not met after the scheduler returned.
Do not wait on capped trajectories or refit unchanged results.
Wrote /data/qhong7/qhong7/sluschi_auto/98165ca6-ed4d-4578-94fd-48d316ad16b6/PuN/Dir_lammps/cost_table.out
Collected 38 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 12
Total log files (incl. subruns) = 38
Total wall time = 1:51:37
Total seconds = 6697
Total GPU hours = 1.86
====================================
=== DFT corrections begin ===
=== PBE correction ===
N rows with PBE energy = 6
MT_LMP = 2598.396299581395
STD_LMP = 108.91217540833678
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -12.21184332
PBE_energy_eV_per_atom = -11.54180935
N_solid_PBE = 3
SEM_lammps_solid_PBE = 5.78687208e-03 eV/atom
SEM_PBE_solid = 6.17381891e-03 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -11.83756432
PBE_energy_eV_per_atom = -11.28229060
N_liquid_PBE = 3
SEM_lammps_liquid_PBE = 7.47733945e-03 eV/atom
SEM_PBE_liquid = 1.08182803e-02 eV/atom
DH_LMP_raw_PBE = 0.37427899 eV/atom
DH_LMP_PBE = 0.37427899 eV/atom
DH_PBE = 0.25951875 eV/atom
STD_DH_LMP_PBE = 9.45507766e-03 eV/atom
STD_DH_PBE = 1.24559716e-02 eV/atom
COV_DH_PBE_LMP = 9.23036347e-05 (eV/atom)^2
DH_raw_PBE = 0.25951875 eV/atom
MT_PBE = 1801.68426325 K
STD_PBE = 95.30445798 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 0
MT_LMP = 2598.396299581395
STD_LMP = 108.91217540833678
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = N/A
R2SCAN_energy_eV_per_atom = N/A
N_solid_R2SCAN = 0
SEM_lammps_solid_R2SCAN = N/A
SEM_R2SCAN_solid = N/A
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = N/A
R2SCAN_energy_eV_per_atom = N/A
N_liquid_R2SCAN = 0
SEM_lammps_liquid_R2SCAN = N/A
SEM_R2SCAN_liquid = N/A
DH_LMP_raw_R2SCAN = N/A
DH_LMP_R2SCAN = N/A
DH_R2SCAN = N/A
STD_DH_LMP_R2SCAN = N/A
STD_DH_R2SCAN = N/A
COV_DH_R2SCAN_LMP = N/A
MT_R2SCAN = N/A
STD_R2SCAN = N/A
=== DFT corrections end ===
Pu1 N1 1.0 3.0303081199999999 0.0000000100000000 1.7495497799999999 1.0101030600000001 2.8570012700000000 1.7495497799999999 0.0000000100000000 0.0000000100000000 3.4990985100000001 Pu N 1 1 direct -0.0000000000000000 -0.0000000000000000 0.0000000000000000 Pu 0.5000000000000000 0.5000000000000000 0.5000000000000000 N
No output files have been received yet.