=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
5.3325304300000003 7.5413357399999992 6.1574740000000006
2.6662681999999998 -7.5413357399999992 7.6968455000000002
9.7763100999999999 -2.5137785799999999 -4.6181084999999999
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
11.101 11.101 11.101 85.588 87.796 87.796
In UNIT-cell, number of atoms: 1 1 total: 2
Inverse Matrix is:
3.9778710118860902E-002 1.4206690886839499E-002 7.6716057696064197E-002
6.4292140005095921E-002 -6.2282981906894963E-002 -1.8082145218313500E-002
4.9213395720958224E-002 6.3977414437245694E-002 -4.4292056148862405E-002
In SUPER-cell, number of atoms: 66 66 total: 132
POSCAR_STRCT atoms = 132
Accepted radius = 11 with 132 atoms
====================================================================================================
/data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps
['Si', 'C']
elements: ['Si', 'C']
counts: [66, 66]
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500
Start running job (temp, id) 500 1000 ...
Using closest available scale or default: 1.0
==============================
Iteration 1
Current scale = 1.0
Pressure = 2141.441312
Converged!
Now running full trajectory...
Completed!
==============================
1000
Start running job (temp, id) 1000 1000 ...
Using closest available scale or default: 1.0
==============================
Iteration 1
Current scale = 1.0
Pressure = 22566.067200
New scale = 1.01
==============================
Iteration 2
Current scale = 1.01
Pressure = -36178.711500
Step reduced to 0.005
New scale = 1.0050000000000001
==============================
Iteration 3
Current scale = 1.0050000000000001
Pressure = -6868.336730
New scale = 1.0000000000000002
==============================
Iteration 4
Current scale = 1.0000000000000002
Pressure = 22566.046500
Step reduced to 0.0025
New scale = 1.0025000000000002
==============================
Iteration 5
Current scale = 1.0025000000000002
Pressure = 7475.132490
New scale = 1.0050000000000001
Now running full trajectory...
Completed!
==============================
1500
Start running job (temp, id) 1500 1000 ...
Using closest available scale or default: 1.0050000000000001
==============================
Iteration 1
Current scale = 1.0050000000000001
Pressure = 13987.592310
New scale = 1.0150000000000001
==============================
Iteration 2
Current scale = 1.0150000000000001
Pressure = -44191.596400
Step reduced to 0.005
New scale = 1.0100000000000002
==============================
Iteration 3
Current scale = 1.0100000000000002
Pressure = -16399.849930
New scale = 1.0050000000000003
==============================
Iteration 4
Current scale = 1.0050000000000003
Pressure = 13937.701410
Step reduced to 0.0025
New scale = 1.0075000000000003
==============================
Iteration 5
Current scale = 1.0075000000000003
Pressure = -1475.901790
Converged!
Now running full trajectory...
Completed!
==============================
2000
Start running job (temp, id) 2000 1000 ...
Using closest available scale or default: 1.0075000000000003
==============================
Iteration 1
Current scale = 1.0075000000000003
Pressure = 21418.593770
New scale = 1.0175000000000003
==============================
Iteration 2
Current scale = 1.0175000000000003
Pressure = -36153.473600
Step reduced to 0.005
New scale = 1.0125000000000004
==============================
Iteration 3
Current scale = 1.0125000000000004
Pressure = -7019.220380
New scale = 1.0075000000000005
==============================
Iteration 4
Current scale = 1.0075000000000005
Pressure = 25760.890600
Step reduced to 0.0025
New scale = 1.0100000000000005
==============================
Iteration 5
Current scale = 1.0100000000000005
Pressure = 5586.998761
New scale = 1.0125000000000004
Now running full trajectory...
Completed!
==============================
500, 500, 1
Adaptive temp step = 100
500
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.out
Collected 4 folders
Wrote phase_pred.csv
Label counts:
solid = 4
liquid = 0
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2044.93 K
Uncertainty = 6616.05 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2044.9288524999999 6637.1692868985992
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2800.0 K
2800, 2800, 1
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1000 ...
Using closest available scale or default: 1.0125000000000004
==============================
Iteration 1
Current scale = 1.0125000000000004
Pressure = 69663.117000
New scale = 1.0225000000000004
==============================
Iteration 2
Current scale = 1.0225000000000004
Pressure = -12745.207160
Step reduced to 0.005
New scale = 1.0175000000000005
==============================
Iteration 3
Current scale = 1.0175000000000005
Pressure = 26804.821000
Step reduced to 0.0025
New scale = 1.0200000000000005
==============================
Iteration 4
Current scale = 1.0200000000000005
Pressure = 25446.303000
New scale = 1.0225000000000004
==============================
Iteration 5
Current scale = 1.0225000000000004
Pressure = -25657.658770
Step reduced to 0.00125
New scale = 1.0212500000000004
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.out
Collected 5 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 0
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2859.99 K
Uncertainty = 9716.03 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2859.9890240000004 9733.8672019560563
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 3600.0 K
3600, 3600, 1
Adaptive temp step = 100
3600
Start running job (temp, id) 3600 1000 ...
Using closest available scale or default: 1.0212500000000004
==============================
Iteration 1
Current scale = 1.0212500000000004
Pressure = 151225.076000
New scale = 1.0312500000000004
==============================
Iteration 2
Current scale = 1.0312500000000004
Pressure = 119458.227400
New scale = 1.0412500000000005
==============================
Iteration 3
Current scale = 1.0412500000000005
Pressure = 93694.585460
New scale = 1.0512500000000005
==============================
Iteration 4
Current scale = 1.0512500000000005
Pressure = 77187.977000
New scale = 1.0612500000000005
==============================
Iteration 5
Current scale = 1.0612500000000005
Pressure = 63683.501500
New scale = 1.0712500000000005
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.out
Collected 6 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 1
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
3600 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2891.45 K
Uncertainty = 14286.88 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2891.4451080000003 14261.725591254431
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 1 0 1
3600 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 3200.0000000000000 K
3200, 3200, 1
Adaptive temp step = 100
3200
Start running job (temp, id) 3200 1000 ...
Using closest available scale or default: 1.0212500000000004
==============================
Iteration 1
Current scale = 1.0212500000000004
Pressure = 98823.068900
New scale = 1.0312500000000004
==============================
Iteration 2
Current scale = 1.0312500000000004
Pressure = 77403.995300
New scale = 1.0412500000000005
==============================
Iteration 3
Current scale = 1.0412500000000005
Pressure = -14979.636000
Step reduced to 0.005
New scale = 1.0362500000000006
==============================
Iteration 4
Current scale = 1.0362500000000006
Pressure = 68851.028940
Step reduced to 0.0025
New scale = 1.0387500000000005
==============================
Iteration 5
Current scale = 1.0387500000000005
Pressure = 57504.763800
New scale = 1.0412500000000005
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.out
Collected 7 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 2
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
3200 | 0 | 1 | 1
3600 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2889.21 K
Uncertainty = 14372.40 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2889.2136659999996 14402.591322149550
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 1 0 1
3200 0 1 1
3600 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 2800.0000000000000 K
next job: 4 MD duplicate(s) at 3200.0000000000000 K
2800, 2800, 4
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1100 ...
Using scale from current temperature folder: 1.0212500000000004
==============================
Iteration 1
Current scale = 1.0212500000000004
Pressure = 28303.644000
New scale = 1.0312500000000004
==============================
Iteration 2
Current scale = 1.0312500000000004
Pressure = -50115.134800
Step reduced to 0.005
New scale = 1.0262500000000006
==============================
Iteration 3
Current scale = 1.0262500000000006
Pressure = -47378.018600
New scale = 1.0212500000000007
==============================
Iteration 4
Current scale = 1.0212500000000007
Pressure = 41920.216000
Step reduced to 0.0025
New scale = 1.0237500000000006
==============================
Iteration 5
Current scale = 1.0237500000000006
Pressure = 16812.119000
New scale = 1.0262500000000006
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2800 1200 ...
Using scale from current temperature folder: 1.0262500000000006
==============================
Iteration 1
Current scale = 1.0262500000000006
Pressure = -34313.025340
Step reduced to 0.005
New scale = 1.0212500000000007
==============================
Iteration 2
Current scale = 1.0212500000000007
Pressure = -3947.698033
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2800 1300 ...
Using scale from current temperature folder: 1.0212500000000007
==============================
Iteration 1
Current scale = 1.0212500000000007
Pressure = -13233.362720
Step reduced to 0.005
New scale = 1.0162500000000008
==============================
Iteration 2
Current scale = 1.0162500000000008
Pressure = 1612.720700
Converged!
Now running full trajectory...
Completed!
==============================
3200, 3200, 4
Adaptive temp step = 100
3200
Start running job (temp, id) 3200 1100 ...
Using scale from current temperature folder: 1.0412500000000005
==============================
Iteration 1
Current scale = 1.0412500000000005
Pressure = 85101.261900
New scale = 1.0512500000000005
==============================
Iteration 2
Current scale = 1.0512500000000005
Pressure = 10969.883410
New scale = 1.0612500000000005
==============================
Iteration 3
Current scale = 1.0612500000000005
Pressure = 31955.647600
New scale = 1.0712500000000005
==============================
Iteration 4
Current scale = 1.0712500000000005
Pressure = 19260.274300
New scale = 1.0812500000000005
==============================
Iteration 5
Current scale = 1.0812500000000005
Pressure = -884.476593
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 3200 1200 ...
Using scale from current temperature folder: 1.0812500000000005
==============================
Iteration 1
Current scale = 1.0812500000000005
Pressure = 16832.347900
New scale = 1.0912500000000005
==============================
Iteration 2
Current scale = 1.0912500000000005
Pressure = 12530.866700
New scale = 1.1012500000000005
==============================
Iteration 3
Current scale = 1.1012500000000005
Pressure = -2254.519180
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 3200 1300 ...
Using scale from current temperature folder: 1.1012500000000005
==============================
Iteration 1
Current scale = 1.1012500000000005
Pressure = -7619.837840
Step reduced to 0.005
New scale = 1.0962500000000006
==============================
Iteration 2
Current scale = 1.0962500000000006
Pressure = -5112.149160
New scale = 1.0912500000000007
==============================
Iteration 3
Current scale = 1.0912500000000007
Pressure = 4297.764840
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.out
Collected 13 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 5
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 4 | 0 | 4
3200 | 0 | 4 | 4
3600 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2997.33 K
Uncertainty = 106.78 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2997.0921240684556 106.46996693367734
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 4 0 4
3200 0 4 4
3600 0 1 1
current fit
1 2997.0921240684556 106.46996693367734
possibilities:
current fit
0 2997.0921240684556 106.46996693367734
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg
------ ---------------- ---------------- ----------- ------------------- ------------ ------------ ---------- ------------------ ------
1000/1 -7.992209 0.128107 994.845122 10.543223 -5803.437575 0.00000044 up 3.330e-08 P1 (1)
1500/1 -7.926168 0.194459 1510.121135 10.603577 298.960668 -0.00000037 down 1.100e-08 P1 (1)
2000/1 -7.854774 0.257245 1997.700670 10.654516 8887.036005 -0.00000033 down 4.670e-08 P1 (1)
2800/1 -7.736570 0.359979 2795.508355 10.745848 22483.720100 -0.00000110 down 3.030e-08 P1 (1)
2800/2 -7.606990 0.358811 2786.433650 10.909319 19295.019200 -0.00000682 down 8.440e-08 P1 (1)
2800/3 -7.711019 0.367079 2850.641985 10.815199 14913.232300 -0.00000571 down 4.360e-08 P1 (1)
2800/4 -7.672336 0.366311 2844.677620 10.925222 1250.217179 -0.00000189 down 6.790e-08 P1 (1)
3200/1 -6.638175 0.413226 3209.012815 13.587962 19372.891365 0.00001175 up 1.060e-04 P1 (1)
3200/2 -6.598573 0.413801 3213.478040 14.211906 10191.287965 0.00000651 up 1.490e-04 P1 (1)
3200/3 -6.575819 0.406668 3158.079245 14.491451 8037.855694 0.00000596 up 1.610e-04 P1 (1)
3200/4 -6.589034 0.417335 3240.922220 14.388367 10045.395355 0.00000401 up 1.220e-04 P1 (1)
3600/1 -6.478099 0.459182 3565.891780 14.295713 14624.928165 0.00001019 up 2.290e-04 P1 (1)
500/1 -8.060139 0.064471 500.663393 10.428519 -929.806804 0.00000001 up 3.640e-09 P1 (1)
======================================================================================================================================================
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/summary.out
Collected 13 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 5
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 4 | 0 | 4
3200 | 0 | 4 | 4
3600 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2997.46 K
Uncertainty = 106.92 K
====================================
Wrote /data/qhong7/qhong7/sluschi_auto/8e29aee2-44b3-4bab-86d2-daa78a6e98d8/SiC/Dir_lammps/cost_table.out
Collected 64 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 13
Total log files (incl. subruns) = 64
Total wall time = 16:05:31
Total seconds = 57931
Total GPU hours = 16.09
====================================
=== PBE correction ===
N rows with PBE energy = 8
MT_LMP = 2997.458544527059
STD_LMP = 106.91815788494574
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -7.68384697
PBE_energy_eV_per_atom = -7.13016947
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -6.58167178
PBE_energy_eV_per_atom = -6.18974576
DH_LMP_raw_PBE = 1.10217519 eV/atom
DH_LMP_PBE = 1.00632679 eV/atom
DH_PBE = 0.84457531 eV/atom
Cp_solid_PBE = 1.60429021e-04 eV/atom/K
Cp_liquid_PBE = 3.18812973e-04 eV/atom/K
Cp_avg_PBE = 2.39620997e-04 eV/atom/K
DeltaT_PBE = 400.00 K
DH_raw_PBE = 0.94042371 eV/atom
MT_PBE = 2515.66339381 K
Si1 C1 1.0 2.6662662099999999 0.0000000000000000 1.5393685000000001 0.8887547400000000 2.5137785799999999 1.5393685000000001 0.0000000000000000 0.0000000000000000 3.0787380000000000 Si C 1 1 direct 0.2500000000000000 0.2500000000000000 0.2500000000000000 Si 0.0000000000000000 -0.0000000000000000 -0.0000000000000000 C
No output files have been received yet.