=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
0.0000000000000000 0.0000000000000000 -10.412304000000001
0.0000000000000000 10.412304000000001 0.0000000000000000
10.412304000000001 0.0000000000000000 0.0000000000000000
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
10.412 10.412 10.412 90.000 90.000 90.000
In UNIT-cell, number of atoms: 4 4 total: 8
Inverse Matrix is:
0.0000000000000000 -0.0000000000000000 9.6040223182112236E-002
0.0000000000000000 9.6040223182112236E-002 -0.0000000000000000
-9.6040223182112236E-002 0.0000000000000000 0.0000000000000000
In SUPER-cell, number of atoms: 32 32 total: 64
POSCAR_STRCT atoms = 64
Accepted radius = 11 with 64 atoms
====================================================================================================
/data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps
['Sr', 'O']
elements: ['Sr', 'O']
counts: [32, 32]
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500
Start running job (temp, id) 500 1000 ...
Using closest available scale or default: 1.0
==============================
Iteration 1
Current scale = 1.0
Pressure = 6251.167380
New scale = 1.01
==============================
Iteration 2
Current scale = 1.01
Pressure = -14072.035400
Step reduced to 0.005
New scale = 1.0050000000000001
==============================
Iteration 3
Current scale = 1.0050000000000001
Pressure = -4229.293020
Converged!
Now running full trajectory...
Completed!
==============================
1000
Start running job (temp, id) 1000 1000 ...
Using closest available scale or default: 1.0050000000000001
==============================
Iteration 1
Current scale = 1.0050000000000001
Pressure = 9210.026650
New scale = 1.0150000000000001
==============================
Iteration 2
Current scale = 1.0150000000000001
Pressure = -7826.407274
Step reduced to 0.005
New scale = 1.0100000000000002
==============================
Iteration 3
Current scale = 1.0100000000000002
Pressure = -233.726561
Converged!
Now running full trajectory...
Completed!
==============================
1500
Start running job (temp, id) 1500 1000 ...
Using closest available scale or default: 1.0100000000000002
==============================
Iteration 1
Current scale = 1.0100000000000002
Pressure = 18588.512800
New scale = 1.0200000000000002
==============================
Iteration 2
Current scale = 1.0200000000000002
Pressure = 702.080727
Converged!
Now running full trajectory...
Completed!
==============================
2000
Start running job (temp, id) 2000 1000 ...
Using closest available scale or default: 1.0200000000000002
==============================
Iteration 1
Current scale = 1.0200000000000002
Pressure = 16429.976120
New scale = 1.0300000000000002
==============================
Iteration 2
Current scale = 1.0300000000000002
Pressure = 2658.126090
Converged!
Now running full trajectory...
Completed!
==============================
500, 500, 1
Adaptive temp step = 100
500
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.out
Collected 4 folders
Wrote phase_pred.csv
Label counts:
solid = 4
liquid = 0
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2044.93 K
Uncertainty = 6646.66 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2044.9288524999999 6615.4783662971240
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2800.0 K
2800, 2800, 1
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1000 ...
Using closest available scale or default: 1.0300000000000002
==============================
Iteration 1
Current scale = 1.0300000000000002
Pressure = 35869.752600
New scale = 1.0400000000000003
==============================
Iteration 2
Current scale = 1.0400000000000003
Pressure = 19302.591740
New scale = 1.0500000000000003
==============================
Iteration 3
Current scale = 1.0500000000000003
Pressure = 9520.277738
New scale = 1.0600000000000003
==============================
Iteration 4
Current scale = 1.0600000000000003
Pressure = 3761.768695
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.out
Collected 5 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 0
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2859.99 K
Uncertainty = 9722.93 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2859.9890240000004 9744.1078212406228
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 3600.0 K
3600, 3600, 1
Adaptive temp step = 100
3600
Start running job (temp, id) 3600 1000 ...
Using closest available scale or default: 1.0600000000000003
==============================
Iteration 1
Current scale = 1.0600000000000003
Pressure = 33199.356800
New scale = 1.0700000000000003
==============================
Iteration 2
Current scale = 1.0700000000000003
Pressure = 22477.394070
New scale = 1.0800000000000003
==============================
Iteration 3
Current scale = 1.0800000000000003
Pressure = 23051.958700
New scale = 1.0900000000000003
==============================
Iteration 4
Current scale = 1.0900000000000003
Pressure = 12482.917350
New scale = 1.1000000000000003
==============================
Iteration 5
Current scale = 1.1000000000000003
Pressure = 8288.937154
New scale = 1.1100000000000003
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.out
Collected 6 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 1
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
3600 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2891.45 K
Uncertainty = 14270.31 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2891.4451080000003 14285.718949821825
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 1 0 1
3600 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 3200.0000000000000 K
3200, 3200, 1
Adaptive temp step = 100
3200
Start running job (temp, id) 3200 1000 ...
Using closest available scale or default: 1.0600000000000003
==============================
Iteration 1
Current scale = 1.0600000000000003
Pressure = 20057.652571
New scale = 1.0700000000000003
==============================
Iteration 2
Current scale = 1.0700000000000003
Pressure = 19472.878260
New scale = 1.0800000000000003
==============================
Iteration 3
Current scale = 1.0800000000000003
Pressure = 15386.164550
New scale = 1.0900000000000003
==============================
Iteration 4
Current scale = 1.0900000000000003
Pressure = 9242.085030
New scale = 1.1000000000000003
==============================
Iteration 5
Current scale = 1.1000000000000003
Pressure = 4774.337360
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.out
Collected 7 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 2
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
3200 | 0 | 1 | 1
3600 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2889.21 K
Uncertainty = 14409.52 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2889.2136659999996 14398.663295002470
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 1 0 1
3200 0 1 1
3600 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 2800.0000000000000 K
next job: 4 MD duplicate(s) at 3200.0000000000000 K
2800, 2800, 4
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1100 ...
Using scale from current temperature folder: 1.0600000000000003
==============================
Iteration 1
Current scale = 1.0600000000000003
Pressure = 3650.292730
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2800 1200 ...
Using scale from current temperature folder: 1.0600000000000003
==============================
Iteration 1
Current scale = 1.0600000000000003
Pressure = 2927.550403
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2800 1300 ...
Using scale from current temperature folder: 1.0600000000000003
==============================
Iteration 1
Current scale = 1.0600000000000003
Pressure = 19553.878390
New scale = 1.0700000000000003
==============================
Iteration 2
Current scale = 1.0700000000000003
Pressure = -13377.632780
Step reduced to 0.005
New scale = 1.0650000000000004
==============================
Iteration 3
Current scale = 1.0650000000000004
Pressure = -1167.294218
Converged!
Now running full trajectory...
Completed!
==============================
3200, 3200, 4
Adaptive temp step = 100
3200
Start running job (temp, id) 3200 1100 ...
Using scale from current temperature folder: 1.1000000000000003
==============================
Iteration 1
Current scale = 1.1000000000000003
Pressure = 9922.289840
New scale = 1.1100000000000003
==============================
Iteration 2
Current scale = 1.1100000000000003
Pressure = -4428.906210
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 3200 1200 ...
Using scale from current temperature folder: 1.1100000000000003
==============================
Iteration 1
Current scale = 1.1100000000000003
Pressure = 150.305738
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 3200 1300 ...
Using scale from current temperature folder: 1.1100000000000003
==============================
Iteration 1
Current scale = 1.1100000000000003
Pressure = 361.407720
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.out
Collected 13 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 5
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 4 | 0 | 4
3200 | 0 | 4 | 4
3600 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2997.88 K
Uncertainty = 106.63 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2997.4769469547896 106.61012698722770
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 4 0 4
3200 0 4 4
3600 0 1 1
current fit
1 2997.4769469547896 106.61012698722770
possibilities:
current fit
0 2997.4769469547896 106.61012698722770
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg
------ ---------------- ---------------- ----------- ------------------- ------------ ------------ ---------- ------------------ -----------
1000/1 -5.914060 0.127218 991.951838 18.604978 580.350763 0.00000047 up 5.580e-09 P1 (1)
1500/1 -5.837380 0.191100 1490.051970 19.209371 -790.648475 0.00000031 up 5.090e-08
2000/1 -5.749394 0.254024 1980.692700 19.952231 -3261.256841 0.00000160 up 6.620e-08 P1 (1)
2800/1 -5.590911 0.358509 2795.388030 21.400551 -3174.793834 -0.00000209 down 2.060e-07 P1 (1)
2800/2 -5.578779 0.355312 2770.457120 21.541199 -2326.445817 0.00000095 up 1.070e-08 P1 (1)
2800/3 -5.567199 0.362737 2828.348340 21.893786 -5603.132731 -0.00000411 down 3.630e-07 P1 (1)
2800/4 -5.569536 0.358759 2797.337065 21.790004 -6987.207990 -0.00000347 down 4.830e-07 P1 (1)
3200/1 -5.221011 0.408498 3185.159575 25.703653 7122.063744 0.00001418 up 9.890e-05 P1 (1)
3200/2 -5.228870 0.404674 3155.348305 25.971695 6931.967945 0.00000394 up 1.640e-04 P1 (1)
3200/3 -5.223017 0.404017 3150.222495 25.919487 7131.758755 0.00000854 up 9.100e-05 P1 (1)
3200/4 -5.239125 0.415173 3237.212540 25.986339 7829.015070 0.00000072 up 9.010e-05 P1 (1)
3600/1 -5.157838 0.453815 3538.510160 26.596596 7607.571070 0.00000668 up 2.040e-04 P1 (1)
500/1 -5.982964 0.062512 487.419672 18.187396 -2004.107911 0.00000064 up 2.550e-08 Fm-3m (225)
======================================================================================================================================================
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/summary.out
Collected 13 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 5
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 4 | 0 | 4
3200 | 0 | 4 | 4
3600 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2997.08 K
Uncertainty = 106.42 K
====================================
Wrote /data/qhong7/qhong7/sluschi_auto/8dd5c289-958d-4164-b9aa-91b899dd8ee2/Sr4O4/Dir_lammps/cost_table.out
Collected 46 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 13
Total log files (incl. subruns) = 46
Total wall time = 6:59:58
Total seconds = 25198
Total GPU hours = 7.00
====================================
=== PBE correction ===
N rows with PBE energy = 8
MT_LMP = 2997.081903238327
STD_LMP = 106.41841507723814
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -5.57723066
PBE_energy_eV_per_atom = -5.55732450
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -5.23914285
PBE_energy_eV_per_atom = -5.23132013
DH_LMP_raw_PBE = 0.33808781 eV/atom
DH_LMP_PBE = 0.25748480 eV/atom
DH_PBE = 0.24540136 eV/atom
Cp_solid_PBE = 1.76125699e-04 eV/atom/K
Cp_liquid_PBE = 2.26889355e-04 eV/atom/K
Cp_avg_PBE = 2.01507527e-04 eV/atom/K
DeltaT_PBE = 400.00 K
DH_raw_PBE = 0.32600437 eV/atom
MT_PBE = 2856.43259469 K
POSCAR 1.0 5.206152 0.000000 0.000000 0.000000 5.206152 0.000000 0.000000 0.000000 5.206152 Sr O 4 4 direct 0.500000 0.000000 0.000000 Sr 0.500000 0.500000 0.500000 Sr 0.000000 0.000000 0.500000 Sr 0.000000 0.500000 0.000000 Sr 0.000000 0.000000 0.000000 O 0.000000 0.500000 0.500000 O 0.500000 0.000000 0.500000 O 0.500000 0.500000 0.000000 O
No output files have been received yet.