| Method / sample set | ΔH | ΔS estimate |
|---|---|---|
| uMLIP (PBE sample set) |
0.108616 ± 0.00668 eV/atom
10.4799 ± 0.645 kJ/mol of atoms
|
0.000115896 ± 8.3e-06
eV/(atom K)
11.1822 ± 0.801 J/(mol of atoms K)
|
| PBE |
0.111818 ± 0.00661 eV/atom
10.7888 ± 0.638 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
11.1822 ± 0.801 J/(mol of atoms K)
|
| uMLIP (R2SCAN sample set) |
0.108616 ± 0.00668 eV/atom
10.4799 ± 0.645 kJ/mol of atoms
|
0.000115896 ± 8.3e-06
eV/(atom K)
11.1822 ± 0.801 J/(mol of atoms K)
|
| R2SCAN |
0.129596 ± 0.00754 eV/atom
12.5041 ± 0.728 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
11.1822 ± 0.801 J/(mol of atoms K)
|
ΔH is the liquid-minus-solid value reported by the existing correction workflow. Each uMLIP row uses the sample set matched to that DFT method. Uncertainties are standard errors; — means unavailable.
ΔS is estimated as ΔHuMLIP/Tm,uMLIP. Its propagated uncertainty assumes these two quantities are independent. The current PBE/R2SCAN correction inherits this entropy estimate; it is not an independently calculated DFT entropy.
| Sample set | Cp,solid | Cp,liquid |
|---|---|---|
| uMLIP (PBE sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
| uMLIP (R2SCAN sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
Values reported in SLUSCHI.out by the correction workflow. These are uMLIP potential-energy–temperature slopes for the PBE/R2SCAN sample sets, not full thermodynamic heat capacities or independent DFT heat capacities. The workflow may substitute the other phase's slope when one is unavailable. Uncertainties are not reported; — means unavailable.
| Vsolid [ų/atom] | Vliquid [ų/atom] | ΔV [ų/atom] |
|---|---|---|
| — | — | — |
=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
-4.5626879999999996 6.4526120000000002 -7.9028039999999997
-9.1253720000000005 -6.4526120000000002 -3.9999999970063982E-006
-4.5626879999999996 6.4526120000000002 7.9028039999999997
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
11.176 11.176 11.176 90.000 90.000 90.000
In UNIT-cell, number of atoms: 1 1 total: 2
Inverse Matrix is:
-3.6528167390066146E-002 -7.3056371757575594E-002 -3.6528204367509441E-002
5.1658672331042675E-002 -5.1658681901504230E-002 5.1658646184028587E-002
-6.3268682862437184E-002 0.0000000000000000 6.3268682862437184E-002
In SUPER-cell, number of atoms: 32 32 total: 64
POSCAR_STRCT atoms = 64
Accepted radius = 11 with 64 atoms
====================================================================================================
=== SLUSCHI fit-first-1-guard1; source: /u/hqj/sluschi-up/src ===
/projects/bhin/hqj/sluschi_auto/87c917c7-15f7-46af-bff3-538b13cb2b01/NaCl/Dir_lammps
['Na', 'Cl']
elements: ['Na', 'Cl']
counts: [32, 32]
solid atom IDs: 1:64
liquid atom IDs: 65:128
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 500/1, step_param=1000
Pressure trial 1: scale=1.0
Pressure = 24852.2901
Pressure trial 2: scale=1.01
Pressure = 17596.5048
Pressure trial 3: scale=1.02
Pressure = 11194.28828
Pressure trial 4: scale=1.03
Pressure = 5656.91278
Pressure trial 5: scale=1.04
Pressure = 720.100558
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1000 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1000/1, step_param=1000
Pressure trial 1: scale=1.04
Pressure = 21613.3867
Pressure trial 2: scale=1.05
Pressure = 15743.80486
Pressure trial 3: scale=1.06
Pressure = 12265.006999
Pressure trial 4: scale=1.07
Pressure = 9944.80127
Pressure trial 5: scale=1.08
Pressure = 6875.89228
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1000 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Initial scan stopped at 1000 K: confirmed liquid. Fitting before further MD.
Wrote summary.csv and summary.out for 2 trajectories
Wrote phase_pred.csv: {'liquid': 1, 'solid': 1}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
FIT NOW: reporting the partial batch before further MD.
=== running MPFit ===
Melting temperature and std error: 511.99808600000000 3508.2121769339901
500 1 0 1
1000 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 750.00000000000000 K
750, 750, 1
Adaptive temp step = 100
750 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 750/1, step_param=1000
Pressure trial 1: scale=1.04
Pressure = 11318.7525
Pressure trial 2: scale=1.05
Pressure = 7545.246128
Pressure trial 3: scale=1.06
Pressure = 4190.34589
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
750 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 3 trajectories
Wrote phase_pred.csv: {'liquid': 1, 'solid': 2}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 762.45089599999994 3485.7389289925318
500 1 0 1
750 1 0 1
1000 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 875.00000000000000 K
875, 875, 1
Adaptive temp step = 100
875 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 875/1, step_param=1000
Pressure trial 1: scale=1.06
Pressure = 10632.42022
Pressure trial 2: scale=1.07
Pressure = 6857.86388
Pressure trial 3: scale=1.08
Pressure = 5535.44371
Pressure trial 4: scale=1.09
Pressure = 3148.440964
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
875 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 4 trajectories
Wrote phase_pred.csv: {'liquid': 1, 'solid': 3}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 884.63501600000006 2784.0373920148372
500 1 0 1
750 1 0 1
875 1 0 1
1000 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 875.00000000000000 K
next job: 4 MD duplicate(s) at 1000.0000000000000 K
875, 875, 4
Adaptive temp step = 100
875 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 875/2, step_param=1100
Pressure trial 1: scale=1.09
Pressure = 1134.997165
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
875 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 875/3, step_param=1200
Pressure trial 1: scale=1.09
Pressure = 2428.005334
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
875 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 875/4, step_param=1300
Pressure trial 1: scale=1.09
Pressure = 494.208773
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
875 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
1000, 1000, 4
Adaptive temp step = 100
1000 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 1000/2, step_param=1100
Pressure trial 1: scale=1.08
Pressure = 6781.93744
Pressure trial 2: scale=1.09
Pressure = 6121.297634
Pressure trial 3: scale=1.1
Pressure = 2778.85618
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1000 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 1000/3, step_param=1200
Pressure trial 1: scale=1.1
Pressure = 2313.467922
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1000 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 1000/4, step_param=1300
Pressure trial 1: scale=1.1
Pressure = 2101.94548
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1000 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 10 trajectories
Wrote phase_pred.csv: {'liquid': 4, 'solid': 6}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 937.19045148397197 34.423669648126953
500 1 0 1
750 1 0 1
875 4 0 4
1000 0 4 4
current fit
1 937.19045148397197 34.423669648126953
possibilities:
current fit
0 937.19045148397197 34.423669648126953
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg phase left_phase right_phase left_D [cm^2/s] right_D [cm^2/s] phase_reason last_md_step phase_check
1000/1 -3.117059 0.129091 1006.553881 33.636014 1346.403866 0.00000481 up 5.85636511e-05 P1 (1) liquid liquid liquid 5.79499265e-05 5.91773757e-05 Both original halves agree 21100 RESOLVED
1000/2 -3.122807 0.128140 999.136357 32.747866 2533.647130 0.00000190 up 5.14932393e-05 P1 (1) liquid liquid liquid 4.09530875e-05 3.22373611e-05 Both original halves agree 11200 RESOLVED
1000/3 -3.121964 0.127786 996.382436 31.716059 3870.680192 0.00000613 up 7.37611505e-05 P1 (1) liquid liquid liquid 9.46340065e-05 5.28882945e-05 Both original halves agree 11300 RESOLVED
1000/4 -3.117624 0.125774 980.692469 32.498979 3421.606579 0.00000360 up 4.66812529e-05 P1 (1) liquid liquid liquid 4.55194929e-05 4.78430130e-05 Both original halves agree 11400 RESOLVED
500/1 -3.315778 0.063123 492.189709 24.636616 1441.455256 -0.00000065 down 9.55590768e-08 P1 (1) solid solid solid 8.61543858e-08 1.04963768e-07 Both original halves agree 11100 RESOLVED
750/1 -3.273068 0.096754 754.417541 26.093394 50.961079 -0.00000172 down 0.00000000e+00 solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11100 RESOLVED
875/1 -3.230818 0.115457 900.248439 28.227677 -3632.365970 -0.00000489 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11100 RESOLVED
875/2 -3.219531 0.113333 883.686902 28.903517 -4778.856894 -0.00000500 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11200 RESOLVED
875/3 -3.232172 0.113347 883.795037 28.031212 -3288.892027 -0.00000439 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11300 RESOLVED
875/4 -3.222007 0.113411 884.295620 28.573840 -5021.543520 -0.00000385 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11400 RESOLVED
======================================================================================================================================================
Wrote summary.csv and summary.out for 10 trajectories
Wrote phase_pred.csv: {'liquid': 4, 'solid': 6}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
Wrote /projects/bhin/hqj/sluschi_auto/87c917c7-15f7-46af-bff3-538b13cb2b01/NaCl/Dir_lammps/cost_table.out
Collected 35 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 10
Total log files (incl. subruns) = 35
Total wall time = 1:44:00
Total seconds = 6240
Total GPU hours = 1.73
====================================
=== DFT corrections begin ===
=== PBE correction ===
PBE_METHOD = PBE
N rows with PBE energy = 8
MT_LMP = 937.190451483972
STD_LMP = 34.42366964812695
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -3.23108811
PBE_energy_eV_per_atom = -3.23040505
N_solid_PBE = 4
SEM_lammps_solid_PBE = 5.80608480e-03 eV/atom
SEM_PBE_solid = 5.85103703e-03 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -3.12247162
PBE_energy_eV_per_atom = -3.11858740
N_liquid_PBE = 4
SEM_lammps_liquid_PBE = 3.30443513e-03 eV/atom
SEM_PBE_liquid = 3.06942971e-03 eV/atom
DH_LMP_raw_PBE = 0.10861648 eV/atom
DH_LMP_PBE = 0.10861648 eV/atom
DH_PBE = 0.11181765 eV/atom
STD_DH_LMP_PBE = 6.68056227e-03 eV/atom
STD_DH_PBE = 6.60727122e-03 eV/atom
COV_DH_PBE_LMP = 4.37177128e-05 (eV/atom)^2
DH_raw_PBE = 0.11181765 eV/atom
MT_PBE = 964.81149153 K
STD_PBE = 36.41534118 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 8
MT_LMP = 937.190451483972
STD_LMP = 34.42366964812695
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = -3.23108811
R2SCAN_energy_eV_per_atom = -6.69069476
N_solid_R2SCAN = 4
SEM_lammps_solid_R2SCAN = 5.80608480e-03 eV/atom
SEM_R2SCAN_solid = 6.79497613e-03 eV/atom
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = -3.12247162
R2SCAN_energy_eV_per_atom = -6.56109920
N_liquid_R2SCAN = 4
SEM_lammps_liquid_R2SCAN = 3.30443513e-03 eV/atom
SEM_R2SCAN_liquid = 3.27236261e-03 eV/atom
DH_LMP_raw_R2SCAN = 0.10861648 eV/atom
DH_LMP_R2SCAN = 0.10861648 eV/atom
DH_R2SCAN = 0.12959556 eV/atom
STD_DH_LMP_R2SCAN = 6.68056227e-03 eV/atom
STD_DH_R2SCAN = 7.54188688e-03 eV/atom
COV_DH_R2SCAN_LMP = 5.01933976e-05 (eV/atom)^2
DH_raw_R2SCAN = 0.12959556 eV/atom
MT_R2SCAN = 1118.20707320 K
STD_R2SCAN = 41.64764636 K
=== DFT corrections end ===
Na1 Cl1 1.0 3.4220150000000000 0.0000000000000000 1.9757019999999992 1.1406710000000000 3.2263060000000001 1.9757019999999992 0.0000000000000000 0.0000000000000000 3.9514019999999999 Na Cl 1 1 direct 0.0000000000000000 0.0000000000000000 0.0000000000000000 Na 0.5000000000000000 0.5000000000000000 0.5000000000000000 Cl
No output files have been received yet.