| Method / sample set | ΔH | ΔS estimate |
|---|---|---|
| uMLIP (PBE sample set) |
0.329266 ± 0.0149 eV/atom
31.7694 ± 1.44 kJ/mol of atoms
|
0.000149893 ± 1e-05
eV/(atom K)
14.4625 ± 0.966 J/(mol of atoms K)
|
| PBE |
0.296778 ± 0.0151 eV/atom
28.6347 ± 1.45 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
14.4625 ± 0.966 J/(mol of atoms K)
|
| uMLIP (R2SCAN sample set) |
0.328239 ± 0.0191 eV/atom
31.6702 ± 1.85 kJ/mol of atoms
|
0.000149425 ± 1.14e-05
eV/(atom K)
14.4173 ± 1.1 J/(mol of atoms K)
|
| R2SCAN |
0.34306 ± 0.0218 eV/atom
33.1003 ± 2.1 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
14.4173 ± 1.1 J/(mol of atoms K)
|
ΔH is the liquid-minus-solid value reported by the existing correction workflow. Each uMLIP row uses the sample set matched to that DFT method. Uncertainties are standard errors; — means unavailable.
ΔS is estimated as ΔHuMLIP/Tm,uMLIP. Its propagated uncertainty assumes these two quantities are independent. The current PBE/R2SCAN correction inherits this entropy estimate; it is not an independently calculated DFT entropy.
| Sample set | Cp,solid | Cp,liquid |
|---|---|---|
| uMLIP (PBE sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
| uMLIP (R2SCAN sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
Values reported in SLUSCHI.out by the correction workflow. These are uMLIP potential-energy–temperature slopes for the PBE/R2SCAN sample sets, not full thermodynamic heat capacities or independent DFT heat capacities. The workflow may substitute the other phase's slope when one is unavailable. Uncertainties are not reported; — means unavailable.
| Vsolid [ų/atom] | Vliquid [ų/atom] | ΔV [ų/atom] |
|---|---|---|
| 15.0179 ± 0.156 | 17.6804 ± 0.694 | 2.66245 ± 0.71 |
=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 14
*** Generate a supercell from the current unitcell ***
The supercell is:
-2.7270050200000000 0.0000000000000000 13.635025100000000
13.635025100000000 5.4540100400000000 2.7270050200000000
-5.4540100400000000 13.635025100000000 -2.7270050200000000
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
13.905 14.936 14.936 91.910 96.167 90.000
In UNIT-cell, number of atoms: 1 2 total: 3
Inverse Matrix is:
-1.6887622590055724E-002 6.0312937821627589E-002 -2.4125175128651033E-002
7.2375525385953102E-003 2.6537692641516137E-002 6.2725455334492697E-002
6.9963007873087998E-002 1.2062587564325516E-002 -4.8250350257302071E-003
In SUPER-cell, number of atoms: 76 152 total: 228
POSCAR_STRCT atoms = 228
Accepted radius = 14 with 228 atoms
====================================================================================================
/data/qhong7/qhong7/sluschi_auto/8499aca7-92f4-4c99-830d-a63eff396e7e/UO2/Dir_lammps
['U', 'O']
elements: ['U', 'O']
counts: [76, 152]
solid atom IDs: 1:228
liquid atom IDs: 229:456
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500 K: 0/1 resolved; 0/5 attempts
Starting NEW trajectory 500/1, step_param=1000
Pressure trial 1: scale=1.0
Pressure = -2473.50782
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: solid
500 K: 1/1 resolved; 1/5 attempts
1000 K: 0/1 resolved; 0/5 attempts
Starting NEW trajectory 1000/1, step_param=1000
Pressure trial 1: scale=1.0
Pressure = 39649.2496
Pressure trial 2: scale=1.01
Pressure = 1638.20219
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: solid
1000 K: 1/1 resolved; 1/5 attempts
1500 K: 0/1 resolved; 0/5 attempts
Starting NEW trajectory 1500/1, step_param=1000
Pressure trial 1: scale=1.01
Pressure = 48540.284
Pressure trial 2: scale=1.02
Pressure = 12812.22874
Pressure trial 3: scale=1.03
Pressure = -13021.26243
Pressure trial 4: scale=1.0250000000000001
Pressure = -3057.37704
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: solid
1500 K: 1/1 resolved; 1/5 attempts
2000 K: 0/1 resolved; 0/5 attempts
Starting NEW trajectory 2000/1, step_param=1000
Pressure trial 1: scale=1.0250000000000001
Pressure = 28605.5312
Pressure trial 2: scale=1.0350000000000001
Pressure = 16573.54884
Pressure trial 3: scale=1.0450000000000002
Pressure = -123.58875
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: solid
2000 K: 1/1 resolved; 1/5 attempts
500, 500, 1
Adaptive temp step = 100
500 K: 1/1 resolved; 1/5 attempts
Wrote summary.csv and summary.out for 4 trajectories
Wrote phase_pred.csv: {'solid': 4}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2044.93 K
Uncertainty = 6638.31 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2044.9288524999999 6611.2551967466343
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2800.0 K
2800, 2800, 1
Adaptive temp step = 100
2800 K: 0/1 resolved; 0/5 attempts
Starting NEW trajectory 2800/1, step_param=1000
Pressure trial 1: scale=1.0450000000000002
Pressure = 26585.00731
Pressure trial 2: scale=1.0550000000000002
Pressure = 13993.56082
Pressure trial 3: scale=1.0650000000000002
Pressure = -1197.83589
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: liquid
2800 K: 1/1 resolved; 1/5 attempts
Wrote summary.csv and summary.out for 5 trajectories
Wrote phase_pred.csv: {'solid': 4, 'liquid': 1}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2050.41 K
Uncertainty = 10781.79 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2050.4090095999995 10772.825520710663
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2400.0000000000000 K
2400, 2400, 1
Adaptive temp step = 100
2400 K: 0/1 resolved; 0/5 attempts
Starting NEW trajectory 2400/1, step_param=1000
Pressure trial 1: scale=1.0450000000000002
Pressure = 14469.52023
Pressure trial 2: scale=1.0550000000000002
Pressure = 316.9845
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: liquid
2400 K: 1/1 resolved; 1/5 attempts
Wrote summary.csv and summary.out for 6 trajectories
Wrote phase_pred.csv: {'solid': 4, 'liquid': 2}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2400 | 0 | 1 | 1
2800 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2049.89 K
Uncertainty = 10858.40 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2049.8939384000000 10849.242103416918
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 0 1 1
2800 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 2000.0000000000000 K
next job: 4 MD duplicate(s) at 2400.0000000000000 K
2000, 2000, 4
Adaptive temp step = 100
2000 K: 1/4 resolved; 1/8 attempts
Starting NEW trajectory 2000/2, step_param=1100
Pressure trial 1: scale=1.0450000000000002
Pressure = -6580.6905
Pressure trial 2: scale=1.0400000000000003
Pressure = 4306.20762
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: solid
2000 K: 2/4 resolved; 2/8 attempts
Starting NEW trajectory 2000/3, step_param=1200
Pressure trial 1: scale=1.0400000000000003
Pressure = 6800.76064
Pressure trial 2: scale=1.0500000000000003
Pressure = -11034.34027
Pressure trial 3: scale=1.0450000000000004
Pressure = -6294.95146
Pressure trial 4: scale=1.0400000000000005
Pressure = 7952.35771
Pressure trial 5: scale=1.0425000000000004
Pressure = 4056.49449
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: solid
2000 K: 3/4 resolved; 3/8 attempts
Starting NEW trajectory 2000/4, step_param=1300
Pressure trial 1: scale=1.0425000000000004
Pressure = -4115.60908
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: solid
2000 K: 4/4 resolved; 4/8 attempts
2400, 2400, 4
Adaptive temp step = 100
2400 K: 1/4 resolved; 1/8 attempts
Starting NEW trajectory 2400/2, step_param=1100
Pressure trial 1: scale=1.0550000000000002
Pressure = -1770.64352
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: liquid
2400 K: 2/4 resolved; 2/8 attempts
Starting NEW trajectory 2400/3, step_param=1200
Pressure trial 1: scale=1.0550000000000002
Pressure = -707.57149
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: liquid
2400 K: 3/4 resolved; 3/8 attempts
Starting NEW trajectory 2400/4, step_param=1300
Pressure trial 1: scale=1.0550000000000002
Pressure = -198.51187
Production: at most 10 blocks of 10000 steps, including the first
Completed! Phase: liquid
2400 K: 4/4 resolved; 4/8 attempts
Wrote summary.csv and summary.out for 12 trajectories
Wrote phase_pred.csv: {'solid': 7, 'liquid': 5}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 4 | 0 | 4
2400 | 0 | 4 | 4
2800 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2197.19 K
Uncertainty = 107.81 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2196.6149368211632 107.49515104016047
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 4 0 4
2400 0 4 4
2800 0 1 1
current fit
1 2196.6149368211632 107.49515104016047
possibilities:
current fit
0 2196.6149368211632 107.49515104016047
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg phase left_phase right_phase left_D [cm^2/s] right_D [cm^2/s] phase_reason last_md_step phase_check
1000/1 -10.202204 0.128214 994.086735 13.877655 -7328.787567 0.00000149 up 1.29360728e-08 P1 (1) solid solid solid 0.00000000e+00 3.31651298e-08 Both original halves agree 11100 RESOLVED
1500/1 -10.128262 0.192985 1496.281035 14.007787 14468.013720 -0.00000550 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11100 RESOLVED
2000/1 -9.984118 0.261272 2025.733985 14.733416 5796.017025 -0.00001089 down 6.52259781e-08 P1 (1) solid solid solid 3.19791404e-08 9.84728157e-08 Both original halves agree 11100 RESOLVED
2000/2 -10.000250 0.262743 2037.136140 14.879748 -10473.335618 -0.00001869 down 0.00000000e+00 P1 (1) solid solid solid 1.60942878e-08 0.00000000e+00 Both original halves agree 11200 RESOLVED
2000/3 -9.965157 0.261778 2029.653945 15.096487 -14443.479950 -0.00001437 down 5.17518655e-07 P1 (1) solid solid solid 1.34167736e-07 9.00869574e-07 Both original halves agree 11300 RESOLVED
2000/4 -9.966880 0.257238 1994.452535 14.836255 4864.272051 -0.00000619 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 21400 RESOLVED
2400/1 -9.686864 0.307881 2387.108390 16.930404 11979.920077 0.00001261 up 3.51950286e-05 P1 (1) liquid liquid liquid 3.34701982e-05 3.69198591e-05 Both original halves agree 11100 RESOLVED
2400/2 -9.683420 0.308838 2394.525270 17.144485 9016.917882 0.00000592 up 2.06473174e-05 P1 (1) liquid liquid liquid 1.82147470e-05 2.30798878e-05 Both original halves agree 21200 RESOLVED
2400/3 -9.642588 0.307057 2380.715435 18.388832 -746.328715 0.00000464 up 4.48531528e-05 P1 (1) liquid liquid liquid 4.75774909e-05 4.21288147e-05 Both original halves agree 31300 RESOLVED
2400/4 -9.654232 0.309145 2396.908150 18.309142 -2579.876537 0.00000235 up 4.69783092e-05 P1 (1) liquid liquid liquid 3.98840773e-05 5.40725411e-05 Both original halves agree 41400 RESOLVED
2800/1 -9.602786 0.361451 2802.450670 17.718495 11702.905534 0.00000417 up 5.50584391e-05 P1 (1) liquid liquid liquid 5.37167583e-05 5.64001199e-05 Both original halves agree 11100 RESOLVED
500/1 -10.279120 0.064415 499.433712 13.504743 3151.315433 0.00000003 up 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11100 RESOLVED
======================================================================================================================================================
Wrote summary.csv and summary.out for 12 trajectories
Wrote phase_pred.csv: {'solid': 7, 'liquid': 5}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 4 | 0 | 4
2400 | 0 | 4 | 4
2800 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2196.68 K
Uncertainty = 107.71 K
====================================
Wrote /data/qhong7/qhong7/sluschi_auto/8499aca7-92f4-4c99-830d-a63eff396e7e/UO2/Dir_lammps/cost_table.out
Collected 38 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 12
Total log files (incl. subruns) = 38
Total wall time = 2:33:44
Total seconds = 9224
Total GPU hours = 2.56
====================================
=== DFT corrections begin ===
=== PBE correction ===
PBE_METHOD = PBE
N rows with PBE energy = 8
MT_LMP = 2196.6780307379877
STD_LMP = 107.70501557300871
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -9.99091968
PBE_energy_eV_per_atom = -9.96658155
N_solid_PBE = 4
SEM_lammps_solid_PBE = 1.20790095e-02 eV/atom
SEM_PBE_solid = 1.25277243e-02 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -9.66165323
PBE_energy_eV_per_atom = -9.66980331
N_liquid_PBE = 4
SEM_lammps_liquid_PBE = 8.77448234e-03 eV/atom
SEM_PBE_liquid = 8.36099010e-03 eV/atom
DH_LMP_raw_PBE = 0.32926645 eV/atom
DH_LMP_PBE = 0.32926645 eV/atom
DH_PBE = 0.29677824 eV/atom
STD_DH_LMP_PBE = 1.49296353e-02 eV/atom
STD_DH_PBE = 1.50615415e-02 eV/atom
COV_DH_PBE_LMP = 2.24527680e-04 (eV/atom)^2
DH_raw_PBE = 0.29677824 eV/atom
MT_PBE = 1979.93526436 K
STD_PBE = 97.80442931 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 7
MT_LMP = 2196.6780307379877
STD_LMP = 107.70501557300871
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = -9.98989174
R2SCAN_energy_eV_per_atom = -33.78649270
N_solid_R2SCAN = 3
SEM_lammps_solid_R2SCAN = 1.70203293e-02 eV/atom
SEM_R2SCAN_solid = 1.79723913e-02 eV/atom
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = -9.66165323
R2SCAN_energy_eV_per_atom = -33.44343227
N_liquid_R2SCAN = 4
SEM_lammps_liquid_R2SCAN = 8.77448234e-03 eV/atom
SEM_R2SCAN_liquid = 1.23475131e-02 eV/atom
DH_LMP_raw_R2SCAN = 0.32823851 eV/atom
DH_LMP_R2SCAN = 0.32823851 eV/atom
DH_R2SCAN = 0.34306043 eV/atom
STD_DH_LMP_R2SCAN = 1.91489725e-02 eV/atom
STD_DH_R2SCAN = 2.18052271e-02 eV/atom
COV_DH_R2SCAN_LMP = 4.13047365e-04 (eV/atom)^2
DH_raw_R2SCAN = 0.34306043 eV/atom
MT_R2SCAN = 2295.87111786 K
STD_R2SCAN = 115.05106063 K
=== DFT corrections end ===
U1 O2 1.0 0.0000000000000000 2.7270050200000000 2.7270050200000000 2.7270050200000000 -0.0000000000000000 2.7270050200000000 2.7270050200000000 2.7270050200000000 0.0000000000000000 U O 1 2 direct 0.5000000000000000 0.5000000000000000 0.5000000000000000 U 0.2500000000000000 0.2500000000000000 0.2500000000000000 O 0.7500000000000000 0.7500000000000000 0.7500000000000000 O
No output files have been received yet.