| Method / sample set | ΔH | ΔS estimate |
|---|---|---|
| uMLIP (PBE sample set) |
0.309574 ± 0.0133 eV/atom
29.8694 ± 1.28 kJ/mol of atoms
|
0.000119128 ± 7.15e-06
eV/(atom K)
11.4941 ± 0.69 J/(mol of atoms K)
|
| PBE |
0.286739 ± 0.0142 eV/atom
27.6661 ± 1.37 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
11.4941 ± 0.69 J/(mol of atoms K)
|
| uMLIP (R2SCAN sample set) |
0.309574 ± 0.0133 eV/atom
29.8694 ± 1.28 kJ/mol of atoms
|
0.000119128 ± 7.15e-06
eV/(atom K)
11.4941 ± 0.69 J/(mol of atoms K)
|
| R2SCAN |
0.319924 ± 0.0161 eV/atom
30.868 ± 1.56 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
11.4941 ± 0.69 J/(mol of atoms K)
|
ΔH is the liquid-minus-solid value reported by the existing correction workflow. Each uMLIP row uses the sample set matched to that DFT method. Uncertainties are standard errors; — means unavailable.
ΔS is estimated as ΔHuMLIP/Tm,uMLIP. Its propagated uncertainty assumes these two quantities are independent. The current PBE/R2SCAN correction inherits this entropy estimate; it is not an independently calculated DFT entropy.
| Sample set | Cp,solid | Cp,liquid |
|---|---|---|
| uMLIP (PBE sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
| uMLIP (R2SCAN sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
Values reported in SLUSCHI.out by the correction workflow. These are uMLIP potential-energy–temperature slopes for the PBE/R2SCAN sample sets, not full thermodynamic heat capacities or independent DFT heat capacities. The workflow may substitute the other phase's slope when one is unavailable. Uncertainties are not reported; — means unavailable.
| Vsolid [ų/atom] | Vliquid [ų/atom] | ΔV [ų/atom] |
|---|---|---|
| — | — | — |
=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 14
*** Generate a supercell from the current unitcell ***
The supercell is:
-6.5687819200000002 -9.2896567200000000 7.5849700000000002
-3.2843878400000004 9.2896567499999989 9.4812186199999999
-12.042762420000001 3.0965522099999996 -5.6887336200000007
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
13.674 13.674 13.674 85.588 87.796 87.796
In UNIT-cell, number of atoms: 1 1 total: 2
Inverse Matrix is:
-3.2292343067988581E-002 -1.1532991470802702E-002 -6.2278055283185689E-002
-5.2192294462120883E-002 5.0561274896447135E-002 1.4679104147045654E-002
3.9951396210967112E-002 5.1936814681748829E-002 -3.5956256263870279E-002
In SUPER-cell, number of atoms: 66 66 total: 132
POSCAR_STRCT atoms = 132
Accepted radius = 14 with 132 atoms
====================================================================================================
/data/qhong7/qhong7/sluschi_auto/53cc8a1b-8065-4743-ac56-0bb5509013cc/ThC/Dir_lammps
['Th', 'C']
elements: ['Th', 'C']
counts: [66, 66]
solid atom IDs: 1:132
liquid atom IDs: 133:264
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500
Start running job (temp, id) 500 1000 ...
Pressure trial 1: scale=1.0
Pressure = -132.66676
Production: extend in 10000-step blocks until resolved
Completed! Phase: solid
1000
Start running job (temp, id) 1000 1000 ...
Pressure trial 1: scale=1.0
Pressure = 15859.5519
Pressure trial 2: scale=1.01
Pressure = -11527.45301
Pressure trial 3: scale=1.0050000000000001
Pressure = 374.099572
Production: extend in 10000-step blocks until resolved
Completed! Phase: solid
1500
Start running job (temp, id) 1500 1000 ...
Pressure trial 1: scale=1.0050000000000001
Pressure = 25830.5434
Pressure trial 2: scale=1.0150000000000001
Pressure = 3477.962635
Production: extend in 10000-step blocks until resolved
Completed! Phase: solid
2000
Start running job (temp, id) 2000 1000 ...
Pressure trial 1: scale=1.0150000000000001
Pressure = 26550.03896
Pressure trial 2: scale=1.0250000000000001
Pressure = 3005.658945
Production: extend in 10000-step blocks until resolved
Completed! Phase: solid
500, 500, 1
Adaptive temp step = 100
500
Wrote summary.csv and summary.out for 4 trajectories
Wrote phase_pred.csv: {'solid': 4}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2044.93 K
Uncertainty = 6625.41 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2044.9288524999999 6616.0112167306570
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2800.0 K
2800, 2800, 1
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1000 ...
Pressure trial 1: scale=1.0250000000000001
Pressure = 17826.85183
Pressure trial 2: scale=1.0350000000000001
Pressure = 1139.72437
Production: extend in 10000-step blocks until resolved
Completed! Phase: liquid
Wrote summary.csv and summary.out for 5 trajectories
Wrote phase_pred.csv: {'solid': 4, 'liquid': 1}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2050.41 K
Uncertainty = 10821.25 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2050.4090095999995 10797.281460090504
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2400.0000000000000 K
2400, 2400, 1
Adaptive temp step = 100
2400
Start running job (temp, id) 2400 1000 ...
Pressure trial 1: scale=1.0250000000000001
Pressure = 16080.9267
Pressure trial 2: scale=1.0350000000000001
Pressure = -5300.121189
Pressure trial 3: scale=1.0300000000000002
Pressure = -237.09429
Production: extend in 10000-step blocks until resolved
Completed! Phase: solid
Wrote summary.csv and summary.out for 6 trajectories
Wrote phase_pred.csv: {'solid': 5, 'liquid': 1}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2400 | 1 | 0 | 1
2800 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2452.14 K
Uncertainty = 10435.76 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2452.1437833000000 10431.853317822155
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 2400.0000000000000 K
next job: 4 MD duplicate(s) at 2800.0000000000000 K
2400, 2400, 4
Adaptive temp step = 100
2400
Start running job (temp, id) 2400 1100 ...
Pressure trial 1: scale=1.0300000000000002
Pressure = 6413.17137
Pressure trial 2: scale=1.0400000000000003
Pressure = -16185.795864
Pressure trial 3: scale=1.0350000000000004
Pressure = -4777.07454
Production: extend in 10000-step blocks until resolved
Completed! Phase: solid
Start running job (temp, id) 2400 1200 ...
Pressure trial 1: scale=1.0350000000000004
Pressure = -5058.65836
Pressure trial 2: scale=1.0300000000000005
Pressure = 2910.08363
Production: extend in 10000-step blocks until resolved
Completed! Phase: solid
Start running job (temp, id) 2400 1300 ...
Pressure trial 1: scale=1.0300000000000005
Pressure = 3090.50135
Production: extend in 10000-step blocks until resolved
Completed! Phase: solid
2800, 2800, 4
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1100 ...
Pressure trial 1: scale=1.0350000000000001
Pressure = 4977.53544
Production: extend in 10000-step blocks until resolved
Completed! Phase: liquid
Start running job (temp, id) 2800 1200 ...
Pressure trial 1: scale=1.0350000000000001
Pressure = 4180.556925
Production: extend in 10000-step blocks until resolved
Completed! Phase: liquid
Start running job (temp, id) 2800 1300 ...
Pressure trial 1: scale=1.0350000000000001
Pressure = 2593.18599
Production: extend in 10000-step blocks until resolved
Completed! Phase: liquid
Wrote summary.csv and summary.out for 12 trajectories
Wrote phase_pred.csv: {'solid': 8, 'liquid': 4}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2400 | 4 | 0 | 4
2800 | 0 | 4 | 4
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2598.80 K
Uncertainty = 109.28 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2598.7904985109385 109.08197213744626
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 4 0 4
2800 0 4 4
current fit
1 2598.7904985109385 109.08197213744626
possibilities:
current fit
0 2598.7904985109385 109.08197213744626
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg phase left_phase right_phase left_D [cm^2/s] right_D [cm^2/s] phase_reason
1000/1 -8.464929 0.128876 1000.820658 19.833131 -165.073181 0.00000022 up 6.45162287e-09 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree
1500/1 -8.358977 0.193653 1503.857485 20.479477 3679.381911 -0.00000277 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree
2000/1 -8.258046 0.259877 2018.142015 21.011006 -3682.494519 -0.00001329 down 1.16628658e-06 P1 (1) solid solid solid 0.00000000e+00 2.36914300e-06 Both original halves agree
2400/1 -8.165938 0.308319 2394.329910 21.313658 1318.238344 -0.00000260 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree
2400/2 -8.177520 0.311233 2416.957050 21.334136 -5621.846178 -0.00001695 down 9.88730381e-07 P1 (1) solid solid solid 1.68955485e-08 1.96056521e-06 Both original halves agree
2400/3 -8.145963 0.308043 2392.185625 21.407937 -3862.300517 -0.00000537 down 6.18865176e-07 P1 (1) solid solid solid 2.97636481e-07 9.40093872e-07 Both original halves agree
2400/4 -8.132731 0.311828 2421.577670 21.499442 -314.207387 -0.00000589 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree
2800/1 -7.854304 0.363785 2825.065615 23.234859 -6265.728035 0.00000706 up 4.41765404e-05 P1 (1) liquid liquid liquid 4.32845334e-05 4.50685475e-05 Both original halves agree
2800/2 -7.896176 0.355288 2759.079915 22.476979 6826.867837 0.00000841 up 1.93021751e-05 P1 (1) liquid liquid liquid 1.14048859e-05 2.59577349e-05 Both original halves agree
2800/3 -7.857961 0.361195 2804.949210 23.145565 234.902457 0.00000955 up 3.34411591e-05 P1 (1) liquid liquid liquid 3.57793913e-05 3.11029269e-05 Both original halves agree
2800/4 -7.838472 0.361657 2808.537685 23.524151 -1116.005512 0.00000583 up 5.14279740e-05 P1 (1) liquid liquid liquid 5.08441440e-05 5.20118041e-05 Both original halves agree
500/1 -8.531847 0.064127 497.998082 19.477458 96.608263 -0.00000006 down 0.00000000e+00 P1 (1) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree
======================================================================================================================================================
Wrote summary.csv and summary.out for 12 trajectories
Wrote phase_pred.csv: {'solid': 8, 'liquid': 4}
Wrote jobs_results.out (resolved only); 0 unresolved trajectories
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2400 | 4 | 0 | 4
2800 | 0 | 4 | 4
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2598.68 K
Uncertainty = 109.09 K
====================================
Wrote /data/qhong7/qhong7/sluschi_auto/53cc8a1b-8065-4743-ac56-0bb5509013cc/ThC/Dir_lammps/cost_table.out
Collected 34 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 12
Total log files (incl. subruns) = 34
Total wall time = 1:54:08
Total seconds = 6848
Total GPU hours = 1.90
====================================
=== DFT corrections begin ===
=== PBE correction ===
PBE_METHOD = PBE
N rows with PBE energy = 8
MT_LMP = 2598.680474932394
STD_LMP = 109.08791655362035
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -8.17351449
PBE_energy_eV_per_atom = -8.22052239
N_solid_PBE = 4
SEM_lammps_solid_PBE = 1.18066032e-02 eV/atom
SEM_PBE_solid = 1.19104022e-02 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -7.86394015
PBE_energy_eV_per_atom = -7.93378372
N_liquid_PBE = 4
SEM_lammps_liquid_PBE = 6.10931381e-03 eV/atom
SEM_PBE_liquid = 7.79066034e-03 eV/atom
DH_LMP_raw_PBE = 0.30957434 eV/atom
DH_LMP_PBE = 0.30957434 eV/atom
DH_PBE = 0.28673867 eV/atom
STD_DH_LMP_PBE = 1.32935922e-02 eV/atom
STD_DH_PBE = 1.42320789e-02 eV/atom
COV_DH_PBE_LMP = 1.87046803e-04 (eV/atom)^2
DH_raw_PBE = 0.28673867 eV/atom
MT_PBE = 2406.98949335 K
STD_PBE = 103.67877805 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 8
MT_LMP = 2598.680474932394
STD_LMP = 109.08791655362035
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = -8.17351449
R2SCAN_energy_eV_per_atom = -41.69456137
N_solid_R2SCAN = 4
SEM_lammps_solid_R2SCAN = 1.18066032e-02 eV/atom
SEM_R2SCAN_solid = 1.40372366e-02 eV/atom
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = -7.86394015
R2SCAN_energy_eV_per_atom = -41.37463732
N_liquid_R2SCAN = 4
SEM_lammps_liquid_R2SCAN = 6.10931381e-03 eV/atom
SEM_R2SCAN_liquid = 7.94617863e-03 eV/atom
DH_LMP_raw_R2SCAN = 0.30957434 eV/atom
DH_LMP_R2SCAN = 0.30957434 eV/atom
DH_R2SCAN = 0.31992405 eV/atom
STD_DH_LMP_R2SCAN = 1.32935922e-02 eV/atom
STD_DH_R2SCAN = 1.61302749e-02 eV/atom
COV_DH_R2SCAN_LMP = 2.12956181e-04 (eV/atom)^2
DH_raw_R2SCAN = 0.31992405 eV/atom
MT_R2SCAN = 2685.55974796 K
STD_R2SCAN = 115.44254460 K
=== DFT corrections end ===
Th1 C1 1.0 3.2843899400000001 0.0000000100000000 1.8962445400000001 1.0947973400000000 3.0965522499999998 1.8962445400000001 0.0000000100000000 0.0000000100000000 3.7924870400000001 Th C 1 1 direct 0.5000000000000000 0.5000000000000000 0.5000000000000000 Th -0.0000000000000000 0.0000000000000000 0.0000000000000000 C
No output files have been received yet.