=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
6.8687330800000002 2.7753876100000001 -8.4978502599999999
7.8499806700000008 -2.7753876100000001 6.7982802299999996
-0.98124756999999985 -11.101550440000000 -5.0987101800000003
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
11.274 10.749 12.256 95.032 87.604 95.471
In UNIT-cell, number of atoms: 1 1 total: 2
Inverse Matrix is:
6.0890267440713533E-002 7.3709270902046709E-002 -3.2047508653332939E-003
2.2661008480722791E-002 -2.9459310806008242E-002 -7.7047428306992641E-002
-6.1058727529569465E-002 4.9957140706011371E-002 -2.7753967058895213E-002
In SUPER-cell, number of atoms: 53 53 total: 106
POSCAR_STRCT atoms = 106
Accepted radius = 11 with 106 atoms
====================================================================================================
/data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps
['Ca', 'O']
elements: ['Ca', 'O']
counts: [53, 53]
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500
Start running job (temp, id) 500 1000 ...
Using closest available scale or default: 1.0
==============================
Iteration 1
Current scale = 1.0
Pressure = 14023.892500
New scale = 1.01
==============================
Iteration 2
Current scale = 1.01
Pressure = -11541.426580
Step reduced to 0.005
New scale = 1.0050000000000001
==============================
Iteration 3
Current scale = 1.0050000000000001
Pressure = 754.855815
Converged!
Now running full trajectory...
Completed!
==============================
1000
Start running job (temp, id) 1000 1000 ...
Using closest available scale or default: 1.0050000000000001
==============================
Iteration 1
Current scale = 1.0050000000000001
Pressure = 20858.844900
New scale = 1.0150000000000001
==============================
Iteration 2
Current scale = 1.0150000000000001
Pressure = -5716.673290
Step reduced to 0.005
New scale = 1.0100000000000002
==============================
Iteration 3
Current scale = 1.0100000000000002
Pressure = 7534.186910
Step reduced to 0.0025
New scale = 1.0125000000000002
==============================
Iteration 4
Current scale = 1.0125000000000002
Pressure = 900.427770
Converged!
Now running full trajectory...
Completed!
==============================
1500
Start running job (temp, id) 1500 1000 ...
Using closest available scale or default: 1.0125000000000002
==============================
Iteration 1
Current scale = 1.0125000000000002
Pressure = 21111.760600
New scale = 1.0225000000000002
==============================
Iteration 2
Current scale = 1.0225000000000002
Pressure = -2224.023976
Converged!
Now running full trajectory...
Completed!
==============================
2000
Start running job (temp, id) 2000 1000 ...
Using closest available scale or default: 1.0225000000000002
==============================
Iteration 1
Current scale = 1.0225000000000002
Pressure = 22929.358100
New scale = 1.0325000000000002
==============================
Iteration 2
Current scale = 1.0325000000000002
Pressure = 231.214829
Converged!
Now running full trajectory...
Completed!
==============================
500, 500, 1
Adaptive temp step = 100
500
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.out
Collected 4 folders
Wrote phase_pred.csv
Label counts:
solid = 4
liquid = 0
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2044.93 K
Uncertainty = 6620.79 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2044.9288524999999 6623.5773596515783
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2800.0 K
2800, 2800, 1
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1000 ...
Using closest available scale or default: 1.0325000000000002
==============================
Iteration 1
Current scale = 1.0325000000000002
Pressure = 42943.183000
New scale = 1.0425000000000002
==============================
Iteration 2
Current scale = 1.0425000000000002
Pressure = 12637.501520
New scale = 1.0525000000000002
==============================
Iteration 3
Current scale = 1.0525000000000002
Pressure = -3736.646780
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.out
Collected 5 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 0
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2859.99 K
Uncertainty = 9738.26 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2859.9890240000004 9731.8647958376441
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 3600.0 K
3600, 3600, 1
Adaptive temp step = 100
3600
Start running job (temp, id) 3600 1000 ...
Using closest available scale or default: 1.0525000000000002
==============================
Iteration 1
Current scale = 1.0525000000000002
Pressure = 34443.023200
New scale = 1.0625000000000002
==============================
Iteration 2
Current scale = 1.0625000000000002
Pressure = 39080.144600
New scale = 1.0725000000000002
==============================
Iteration 3
Current scale = 1.0725000000000002
Pressure = 19215.136470
New scale = 1.0825000000000002
==============================
Iteration 4
Current scale = 1.0825000000000002
Pressure = 19048.998400
New scale = 1.0925000000000002
==============================
Iteration 5
Current scale = 1.0925000000000002
Pressure = 2182.278759
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.out
Collected 6 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 1
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
3600 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2891.45 K
Uncertainty = 14261.16 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2891.4451080000003 14282.998342550853
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 1 0 1
3600 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 3200.0000000000000 K
3200, 3200, 1
Adaptive temp step = 100
3200
Start running job (temp, id) 3200 1000 ...
Using closest available scale or default: 1.0525000000000002
==============================
Iteration 1
Current scale = 1.0525000000000002
Pressure = 38878.693800
New scale = 1.0625000000000002
==============================
Iteration 2
Current scale = 1.0625000000000002
Pressure = 15859.008960
New scale = 1.0725000000000002
==============================
Iteration 3
Current scale = 1.0725000000000002
Pressure = 3235.658399
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.out
Collected 7 folders
Wrote phase_pred.csv
Label counts:
solid = 6
liquid = 1
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
3200 | 1 | 0 | 1
3600 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 3278.76 K
Uncertainty = 13793.32 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 3278.7642790000000 13772.291805365057
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 1 0 1
3200 1 0 1
3600 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 3200.0000000000000 K
next job: 4 MD duplicate(s) at 3600.0000000000000 K
3200, 3200, 4
Adaptive temp step = 100
3200
Start running job (temp, id) 3200 1100 ...
Using scale from current temperature folder: 1.0725000000000002
==============================
Iteration 1
Current scale = 1.0725000000000002
Pressure = 4222.079714
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 3200 1200 ...
Using scale from current temperature folder: 1.0725000000000002
==============================
Iteration 1
Current scale = 1.0725000000000002
Pressure = 8486.233825
New scale = 1.0825000000000002
==============================
Iteration 2
Current scale = 1.0825000000000002
Pressure = 8364.295440
New scale = 1.0925000000000002
==============================
Iteration 3
Current scale = 1.0925000000000002
Pressure = -11936.712884
Step reduced to 0.005
New scale = 1.0875000000000004
==============================
Iteration 4
Current scale = 1.0875000000000004
Pressure = -9975.921599
New scale = 1.0825000000000005
==============================
Iteration 5
Current scale = 1.0825000000000005
Pressure = -1371.183693
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 3200 1300 ...
Using scale from current temperature folder: 1.0825000000000005
==============================
Iteration 1
Current scale = 1.0825000000000005
Pressure = -950.750465
Converged!
Now running full trajectory...
Completed!
==============================
3600, 3600, 4
Adaptive temp step = 100
3600
Start running job (temp, id) 3600 1100 ...
Using scale from current temperature folder: 1.0925000000000002
==============================
Iteration 1
Current scale = 1.0925000000000002
Pressure = 11923.145000
New scale = 1.1025000000000003
==============================
Iteration 2
Current scale = 1.1025000000000003
Pressure = 7451.950670
New scale = 1.1125000000000003
==============================
Iteration 3
Current scale = 1.1125000000000003
Pressure = 3636.358410
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 3600 1200 ...
Using scale from current temperature folder: 1.1125000000000003
==============================
Iteration 1
Current scale = 1.1125000000000003
Pressure = 1976.645803
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 3600 1300 ...
Using scale from current temperature folder: 1.1125000000000003
==============================
Iteration 1
Current scale = 1.1125000000000003
Pressure = 6779.378160
New scale = 1.1225000000000003
==============================
Iteration 2
Current scale = 1.1225000000000003
Pressure = -26.875920
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.out
Collected 13 folders
Wrote phase_pred.csv
Label counts:
solid = 9
liquid = 4
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
3200 | 4 | 0 | 4
3600 | 0 | 4 | 4
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 3399.41 K
Uncertainty = 107.93 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 3398.8162468588203 107.29893005542345
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 1 0 1
3200 4 0 4
3600 0 4 4
current fit
1 3398.8162468588203 107.29893005542345
possibilities:
current fit
0 3398.8162468588203 107.29893005542345
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg
------ ---------------- ---------------- ----------- ------------------- ------------- ------------ ---------- ------------------ ------
1000/1 -6.304973 0.128350 997.665228 14.851835 901.964130 0.00000018 up 1.250e-08 P1 (1)
1500/1 -6.225059 0.189644 1474.104550 15.317046 -956.327324 0.00000123 up 5.850e-08 P1 (1)
2000/1 -6.142615 0.256716 1995.450340 15.845310 -1524.077841 0.00000139 up 1.370e-07 P1 (1)
2800/1 -5.973560 0.356043 2767.525585 17.049497 -4649.793550 -0.00000156 down 2.990e-07 P1 (1)
3200/1 -5.865823 0.408016 3171.512780 17.805316 -2156.784857 0.00000311 up 6.120e-07 P1 (1)
3200/2 -5.870586 0.409634 3184.084895 17.754450 -3719.273193 0.00000067 up 8.070e-08 P1 (1)
3200/3 -5.830955 0.408169 3172.699990 18.303839 -10892.657560 -0.00000861 down 1.490e-07 P1 (1)
3200/4 -5.860716 0.406763 3161.770430 17.777251 29.591975 -0.00000365 down 7.840e-07 P1 (1)
3600/1 -5.522560 0.462149 3592.287355 20.737185 17828.487485 0.00000931 up 2.820e-04 P1 (1)
3600/2 -5.513572 0.459142 3568.910705 21.279452 12944.415140 0.00000685 up 1.680e-04 P1 (1)
3600/3 -5.502827 0.459894 3574.759060 21.216542 12156.618087 0.00000909 up 1.440e-04 P1 (1)
3600/4 -5.509458 0.459213 3569.460550 21.460289 9180.821381 0.00000545 up 2.590e-04 P1 (1)
500/1 -6.375646 0.064180 498.868320 14.498674 -13.349347 0.00000007 up 2.050e-10 P1 (1)
======================================================================================================================================================
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/summary.out
Collected 13 folders
Wrote phase_pred.csv
Label counts:
solid = 9
liquid = 4
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 1 | 0 | 1
3200 | 4 | 0 | 4
3600 | 0 | 4 | 4
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 3399.24 K
Uncertainty = 107.93 K
====================================
Wrote /data/qhong7/qhong7/sluschi_auto/3e78d581-4b15-478a-abc3-c6ef9a020054/CaO/Dir_lammps/cost_table.out
Collected 48 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 13
Total log files (incl. subruns) = 48
Total wall time = 13:35:16
Total seconds = 48916
Total GPU hours = 13.59
====================================
=== PBE correction ===
N rows with PBE energy = 8
MT_LMP = 3399.2385969144116
STD_LMP = 107.93029271321804
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -5.85940283
PBE_energy_eV_per_atom = -5.82721886
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -5.50399340
PBE_energy_eV_per_atom = -5.48916064
DH_LMP_raw_PBE = 0.35540943 eV/atom
DH_LMP_PBE = 0.27925367 eV/atom
DH_PBE = 0.26190245 eV/atom
Cp_solid_PBE = 1.90389415e-04 eV/atom/K
Cp_liquid_PBE = 1.90389415e-04 eV/atom/K
Cp_avg_PBE = 1.90389415e-04 eV/atom/K
DeltaT_PBE = 400.00 K
DH_raw_PBE = 0.33805822 eV/atom
MT_PBE = 3188.02947028 K
Ca1 O1 1.0 2.9437427500000002 0.0000000000000000 1.6995700600000001 0.9812475800000000 2.7753876100000001 1.6995700600000001 0.0000000000000000 -0.0000000000000000 3.3991401099999998 Ca O 1 1 direct -0.0000000000000000 -0.0000000000000000 0.0000000000000000 Ca 0.5000000000000000 0.5000000000000000 0.5000000000000000 O
No output files have been received yet.