| Method / sample set | ΔH | ΔS estimate |
|---|---|---|
| uMLIP (PBE sample set) |
0.129457 ± 0.0129 eV/atom
12.4907 ± 1.25 kJ/mol of atoms
|
0.000109062 ± 1.13e-05
eV/(atom K)
10.5228 ± 1.09 J/(mol of atoms K)
|
| PBE |
0.114324 ± 0.0106 eV/atom
11.0306 ± 1.03 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
10.5228 ± 1.09 J/(mol of atoms K)
|
| uMLIP (R2SCAN sample set) |
0.129457 ± 0.0129 eV/atom
12.4907 ± 1.25 kJ/mol of atoms
|
0.000109062 ± 1.13e-05
eV/(atom K)
10.5228 ± 1.09 J/(mol of atoms K)
|
| R2SCAN |
0.130049 ± 0.0127 eV/atom
12.5479 ± 1.23 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
10.5228 ± 1.09 J/(mol of atoms K)
|
ΔH is the liquid-minus-solid value reported by the existing correction workflow. Each uMLIP row uses the sample set matched to that DFT method. Uncertainties are standard errors; — means unavailable.
ΔS is estimated as ΔHuMLIP/Tm,uMLIP. Its propagated uncertainty assumes these two quantities are independent. The current PBE/R2SCAN correction inherits this entropy estimate; it is not an independently calculated DFT entropy.
| Sample set | Cp,solid | Cp,liquid |
|---|---|---|
| uMLIP (PBE sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
| uMLIP (R2SCAN sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
Values reported in SLUSCHI.out by the correction workflow. These are uMLIP potential-energy–temperature slopes for the PBE/R2SCAN sample sets, not full thermodynamic heat capacities or independent DFT heat capacities. The workflow may substitute the other phase's slope when one is unavailable. Uncertainties are not reported; — means unavailable.
| Vsolid [ų/atom] | Vliquid [ų/atom] | ΔV [ų/atom] |
|---|---|---|
| 27.7591 ± 0.468 | 30.2099 ± 0.444 | 2.45077 ± 0.549 |
=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
-4.5626879999999996 6.4526120000000002 -7.9028039999999997
-9.1253720000000005 -6.4526120000000002 -3.9999999970063982E-006
-4.5626879999999996 6.4526120000000002 7.9028039999999997
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
11.176 11.176 11.176 90.000 90.000 90.000
In UNIT-cell, number of atoms: 1 1 total: 2
Inverse Matrix is:
-3.6528167390066146E-002 -7.3056371757575594E-002 -3.6528204367509441E-002
5.1658672331042675E-002 -5.1658681901504230E-002 5.1658646184028587E-002
-6.3268682862437184E-002 0.0000000000000000 6.3268682862437184E-002
In SUPER-cell, number of atoms: 32 32 total: 64
POSCAR_STRCT atoms = 64
Accepted radius = 11 with 64 atoms
====================================================================================================
=== SLUSCHI fit-first-1-guard1; source: /data/qhong7/qhong7/sluschi_lammps/src/ ===
/data/qhong7/qhong7/sluschi_auto/2ec570f2-84e0-4437-bf02-66fc870a51a3/NaCl/Dir_lammps
['Na', 'Cl']
elements: ['Na', 'Cl']
counts: [32, 32]
solid atom IDs: 1:64
liquid atom IDs: 65:128
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 500/1, step_param=1000
Pressure trial 1: scale=1.0
Pressure = 12010.12269
Pressure trial 2: scale=1.01
Pressure = 5206.02567
Pressure trial 3: scale=1.02
Pressure = -834.436013
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1000 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1000/1, step_param=1000
Pressure trial 1: scale=1.02
Pressure = 24773.0815
Pressure trial 2: scale=1.03
Pressure = 18665.2672
Pressure trial 3: scale=1.04
Pressure = 12990.8497
Pressure trial 4: scale=1.05
Pressure = 9067.92295
Pressure trial 5: scale=1.06
Pressure = 5380.86398
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1000 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1500 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1500/1, step_param=1000
Pressure trial 1: scale=1.06
Pressure = 17483.39251
Pressure trial 2: scale=1.07
Pressure = 14522.20141
Pressure trial 3: scale=1.08
Pressure = 11552.59303
Pressure trial 4: scale=1.09
Pressure = 8205.08391
Pressure trial 5: scale=1.1
Pressure = 5954.92519
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Initial scan stopped at 1500 K: confirmed liquid. Fitting before further MD.
Wrote summary.csv and summary.out for 3 trajectories
Wrote phase_pred.csv: {'solid': 2, 'liquid': 1}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
FIT NOW: reporting the partial batch before further MD.
=== running MPFit ===
Melting temperature and std error: 1017.1957800000000 5208.9094707908289
500 1 0 1
1000 1 0 1
1500 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 1250.0000000000000 K
1250, 1250, 1
Adaptive temp step = 100
1250 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1250/1, step_param=1000
Pressure trial 1: scale=1.06
Pressure = 11109.4802
Pressure trial 2: scale=1.07
Pressure = 7029.30989
Pressure trial 3: scale=1.08
Pressure = 5138.04307
Pressure trial 4: scale=1.09
Pressure = 3692.08648
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1250 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 4 trajectories
Wrote phase_pred.csv: {'solid': 2, 'liquid': 2}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 1017.1957800000000 5218.7407440494417
500 1 0 1
1000 1 0 1
1250 0 1 1
1500 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 1125.0000000000000 K
1125, 1125, 1
Adaptive temp step = 100
1125 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1125/1, step_param=1000
Pressure trial 1: scale=1.06
Pressure = 7061.5455
Pressure trial 2: scale=1.07
Pressure = 4278.33196
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1125 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 5 trajectories
Wrote phase_pred.csv: {'solid': 3, 'liquid': 2}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 1145.8156420000000 4978.7070292878288
500 1 0 1
1000 1 0 1
1125 1 0 1
1250 0 1 1
1500 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 1125.0000000000000 K
next job: 4 MD duplicate(s) at 1250.0000000000000 K
1125, 1125, 4
Adaptive temp step = 100
1125 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 1125/2, step_param=1100
Pressure trial 1: scale=1.07
Pressure = 3394.20078
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1125 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 1125/3, step_param=1200
Pressure trial 1: scale=1.07
Pressure = 4617.3062
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1125 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 1125/4, step_param=1300
Pressure trial 1: scale=1.07
Pressure = 2763.51214
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1125 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
1250, 1250, 4
Adaptive temp step = 100
1250 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 1250/2, step_param=1100
Pressure trial 1: scale=1.09
Pressure = -242.788995
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1250 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 1250/3, step_param=1200
Pressure trial 1: scale=1.09
Pressure = 3174.49736
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1250 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 1250/4, step_param=1300
Pressure trial 1: scale=1.09
Pressure = 1662.32389
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1250 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 11 trajectories
Wrote phase_pred.csv: {'solid': 6, 'liquid': 5}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 1187.0074698926642 33.898327441476020
500 1 0 1
1000 1 0 1
1125 4 0 4
1250 0 4 4
1500 0 1 1
current fit
1 1187.0074698926642 33.898327441476020
possibilities:
current fit
0 1187.0074698926642 33.898327441476020
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg phase left_phase right_phase left_D [cm^2/s] right_D [cm^2/s] phase_reason last_md_step phase_check maise_half maise_quarter maise_eighth
1000/1 -3.608454 0.129238 1007.702541 25.733735 -1397.170156 -0.00000397 down 0.00000000e+00 Fm-3m (225) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11100 RESOLVED 0.997524 0.993020 0.983841
1125/1 -3.574375 0.144001 1122.813715 26.756073 -1625.727198 -0.00000240 down 0.00000000e+00 Fm-3m (225) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11100 RESOLVED 0.993266 0.986282 0.964207
1125/2 -3.571866 0.144095 1123.547995 26.947321 -2073.100076 -0.00000222 down 0.00000000e+00 Fm-3m (225) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11200 RESOLVED 0.991562 0.976669 0.952668
1125/3 -3.554018 0.145067 1131.126650 27.812748 -4782.450299 -0.00000407 down 0.00000000e+00 Fm-3m (225) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11300 RESOLVED 0.981032 0.967741 0.926083
1125/4 -3.535210 0.145182 1132.023800 28.370592 -5056.072361 -0.00000153 down 0.00000000e+00 Cm (8) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11400 RESOLVED 0.920703 0.928801 0.896562
1250/1 -3.437788 0.161801 1261.603255 31.106447 1919.376319 0.00000313 up 1.01758057e-04 P1 (1) liquid liquid liquid 9.64494868e-05 1.07066626e-04 Both original halves agree 11100 RESOLVED 0.450820 0.473530 0.518797
1250/2 -3.455116 0.158086 1232.638660 29.956867 3515.268495 0.00000625 up 4.79154492e-05 P1 (1) liquid liquid liquid 3.77310642e-05 3.06587590e-05 Both original halves agree 11200 RESOLVED 0.616547 0.582873 0.521004
1250/3 -3.438142 0.160537 1251.743885 30.476250 2762.651969 0.00000575 up 8.94553701e-05 P1 (1) liquid liquid liquid 9.86618768e-05 8.02488634e-05 Both original halves agree 11300 RESOLVED 0.404836 0.480454 0.476709
1250/4 -3.433292 0.156176 1217.741415 31.091604 1729.398976 0.00000233 up 6.91347470e-05 P1 (1) liquid liquid liquid 5.10052496e-05 7.28735294e-05 Both original halves agree 11400 RESOLVED 0.428301 0.516128 0.497204
1500/1 -3.394734 0.193209 1506.501020 32.435332 2436.727342 0.00000361 up 1.28176460e-04 P1 (1) liquid liquid liquid 8.83985030e-05 1.67954417e-04 Both original halves agree 11100 RESOLVED 0.443170 0.470257 0.497234
500/1 -3.702980 0.063246 493.143387 23.117654 1423.461880 -0.00000009 down 8.57118330e-08 Fm-3m (225) solid solid solid 1.25059063e-07 4.63646033e-08 Both original halves agree 11100 RESOLVED 0.999984 0.999953 0.999517
======================================================================================================================================================
Wrote summary.csv and summary.out for 11 trajectories
Wrote phase_pred.csv: {'solid': 6, 'liquid': 5}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
Wrote /data/qhong7/qhong7/sluschi_auto/2ec570f2-84e0-4437-bf02-66fc870a51a3/NaCl/Dir_lammps/cost_table.out
Collected 36 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 11
Total log files (incl. subruns) = 36
Total wall time = 2:19:09
Total seconds = 8349
Total GPU hours = 2.32
====================================
=== DFT corrections begin ===
=== PBE correction ===
PBE_METHOD = PBE
N rows with PBE energy = 8
MT_LMP = 1187.0074698926642
STD_LMP = 33.89832744147602
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -3.56319594
PBE_energy_eV_per_atom = -3.21202287
N_solid_PBE = 4
SEM_lammps_solid_PBE = 1.07057951e-02 eV/atom
SEM_PBE_solid = 8.44363599e-03 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -3.43373900
PBE_energy_eV_per_atom = -3.09769906
N_liquid_PBE = 4
SEM_lammps_liquid_PBE = 7.27818247e-03 eV/atom
SEM_PBE_liquid = 6.47149699e-03 eV/atom
DH_LMP_raw_PBE = 0.12945693 eV/atom
DH_LMP_PBE = 0.12945693 eV/atom
DH_PBE = 0.11432381 eV/atom
STD_DH_LMP_PBE = 1.29455007e-02 eV/atom
STD_DH_PBE = 1.06383863e-02 eV/atom
COV_DH_PBE_LMP = 1.37054247e-04 (eV/atom)^2
DH_raw_PBE = 0.11432381 eV/atom
MT_PBE = 1048.24989187 K
STD_PBE = 32.37083065 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 8
MT_LMP = 1187.0074698926642
STD_LMP = 33.89832744147602
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = -3.56319594
R2SCAN_energy_eV_per_atom = -6.67580060
N_solid_R2SCAN = 4
SEM_lammps_solid_R2SCAN = 1.07057951e-02 eV/atom
SEM_R2SCAN_solid = 1.04916957e-02 eV/atom
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = -3.43373900
R2SCAN_energy_eV_per_atom = -6.54575113
N_liquid_R2SCAN = 4
SEM_lammps_liquid_R2SCAN = 7.27818247e-03 eV/atom
SEM_R2SCAN_liquid = 7.21546404e-03 eV/atom
DH_LMP_raw_R2SCAN = 0.12945693 eV/atom
DH_LMP_R2SCAN = 0.12945693 eV/atom
DH_R2SCAN = 0.13004948 eV/atom
STD_DH_LMP_R2SCAN = 1.29455007e-02 eV/atom
STD_DH_R2SCAN = 1.27333657e-02 eV/atom
COV_DH_R2SCAN_LMP = 1.64820636e-04 (eV/atom)^2
DH_raw_R2SCAN = 0.13004948 eV/atom
MT_R2SCAN = 1192.44056381 K
STD_R2SCAN = 34.19163534 K
=== DFT corrections end ===
Na1 Cl1 1.0 3.4220150000000000 0.0000000000000000 1.9757019999999992 1.1406710000000000 3.2263060000000001 1.9757019999999992 0.0000000000000000 0.0000000000000000 3.9514019999999999 Na Cl 1 1 direct 0.0000000000000000 0.0000000000000000 0.0000000000000000 Na 0.5000000000000000 0.5000000000000000 0.5000000000000000 Cl
No output files have been received yet.