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Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
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Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
-4.5626879999999996 6.4526120000000002 -7.9028039999999997
-9.1253720000000005 -6.4526120000000002 -4.0000000005591119E-006
-4.5626879999999996 6.4526120000000002 7.9028039999999997
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
11.176 11.176 11.176 90.000 90.000 90.000
In UNIT-cell, number of atoms: 1 1 total: 2
Inverse Matrix is:
-3.6528167390066126E-002 -7.3056371757575581E-002 -3.6528204367509455E-002
5.1658672331042675E-002 -5.1658681901504223E-002 5.1658646184028566E-002
-6.3268682862437170E-002 0.0000000000000000 6.3268682862437170E-002
In SUPER-cell, number of atoms: 32 32 total: 64
POSCAR_STRCT atoms = 64
Accepted radius = 11 with 64 atoms
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/data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps
['Na', 'Cl']
elements: ['Na', 'Cl']
counts: [32, 32]
solid atom IDs: 1:64
liquid atom IDs: 65:128
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500
Start running job (temp, id) 500 1000 ...
Using closest available scale or default: 1.0
==============================
Iteration 1
Current scale = 1.0
Pressure = 20094.336000
New scale = 1.01
==============================
Iteration 2
Current scale = 1.01
Pressure = 12251.548850
New scale = 1.02
==============================
Iteration 3
Current scale = 1.02
Pressure = 6153.725250
New scale = 1.03
==============================
Iteration 4
Current scale = 1.03
Pressure = 612.106324
Converged!
Now running full trajectory...
Completed!
==============================
1000
Start running job (temp, id) 1000 1000 ...
Using closest available scale or default: 1.03
==============================
Iteration 1
Current scale = 1.03
Pressure = 24618.513200
New scale = 1.04
==============================
Iteration 2
Current scale = 1.04
Pressure = 19478.466110
New scale = 1.05
==============================
Iteration 3
Current scale = 1.05
Pressure = 16588.691230
New scale = 1.06
==============================
Iteration 4
Current scale = 1.06
Pressure = 11368.611650
New scale = 1.07
==============================
Iteration 5
Current scale = 1.07
Pressure = 8182.476720
New scale = 1.08
Now running full trajectory...
Completed!
==============================
1500
Start running job (temp, id) 1500 1000 ...
Using closest available scale or default: 1.08
==============================
Iteration 1
Current scale = 1.08
Pressure = 14402.810700
New scale = 1.09
==============================
Iteration 2
Current scale = 1.09
Pressure = 11599.052260
New scale = 1.1
==============================
Iteration 3
Current scale = 1.1
Pressure = 8290.484330
New scale = 1.11
==============================
Iteration 4
Current scale = 1.11
Pressure = 5244.650530
New scale = 1.12
==============================
Iteration 5
Current scale = 1.12
Pressure = 4905.811580
Converged!
Now running full trajectory...
Completed!
==============================
2000
Start running job (temp, id) 2000 1000 ...
Using closest available scale or default: 1.12
==============================
Iteration 1
Current scale = 1.12
Pressure = 10871.116620
New scale = 1.1300000000000001
==============================
Iteration 2
Current scale = 1.1300000000000001
Pressure = 9070.532490
New scale = 1.1400000000000001
==============================
Iteration 3
Current scale = 1.1400000000000001
Pressure = 6138.828460
New scale = 1.15
==============================
Iteration 4
Current scale = 1.15
Pressure = 5932.607030
New scale = 1.15
==============================
Iteration 5
Current scale = 1.15
Pressure = 5103.165980
New scale = 1.15
Now running full trajectory...
Completed!
==============================
500, 500, 1
Adaptive temp step = 100
500
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/summary.out
Collected 4 folders
Wrote phase_pred.csv
Label counts:
solid = 1
liquid = 3
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 0 | 1 | 1
1500 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 507.78 K
Uncertainty = 8274.06 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 507.78007199999996 8265.6266864445297
500 1 0 1
1000 0 1 1
1500 0 1 1
2000 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 750.00000000000000 K
750, 750, 1
Adaptive temp step = 100
750
Start running job (temp, id) 750 1000 ...
Using closest available scale or default: 1.03
==============================
Iteration 1
Current scale = 1.03
Pressure = 19215.970100
New scale = 1.04
==============================
Iteration 2
Current scale = 1.04
Pressure = 14372.009080
New scale = 1.05
==============================
Iteration 3
Current scale = 1.05
Pressure = 9721.226370
New scale = 1.06
==============================
Iteration 4
Current scale = 1.06
Pressure = 5656.341350
New scale = 1.07
==============================
Iteration 5
Current scale = 1.07
Pressure = 3362.444250
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/summary.out
Collected 5 folders
Wrote phase_pred.csv
Label counts:
solid = 2
liquid = 3
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
750 | 1 | 0 | 1
1000 | 0 | 1 | 1
1500 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 759.09 K
Uncertainty = 8245.40 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 759.09489150000002 8267.2194154169429
500 1 0 1
750 1 0 1
1000 0 1 1
1500 0 1 1
2000 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 875.00000000000000 K
875, 875, 1
Adaptive temp step = 100
875
Start running job (temp, id) 875 1000 ...
Using closest available scale or default: 1.07
==============================
Iteration 1
Current scale = 1.07
Pressure = 5837.218010
New scale = 1.08
==============================
Iteration 2
Current scale = 1.08
Pressure = 3780.818560
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/summary.out
Collected 6 folders
Wrote phase_pred.csv
Label counts:
solid = 2
liquid = 4
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
750 | 1 | 0 | 1
875 | 0 | 1 | 1
1000 | 0 | 1 | 1
1500 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 758.85 K
Uncertainty = 3298.59 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 758.84672341199996 3309.2065375980087
500 1 0 1
750 1 0 1
875 0 1 1
1000 0 1 1
1500 0 1 1
2000 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 750.00000000000000 K
next job: 4 MD duplicate(s) at 875.00000000000000 K
750, 750, 4
Adaptive temp step = 100
750
Start running job (temp, id) 750 1100 ...
Using scale from current temperature folder: 1.07
==============================
Iteration 1
Current scale = 1.07
Pressure = 1442.655271
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 750 1200 ...
Using scale from current temperature folder: 1.07
==============================
Iteration 1
Current scale = 1.07
Pressure = 4339.491690
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 750 1300 ...
Using scale from current temperature folder: 1.07
==============================
Iteration 1
Current scale = 1.07
Pressure = 5279.655190
New scale = 1.08
==============================
Iteration 2
Current scale = 1.08
Pressure = 306.516952
Converged!
Now running full trajectory...
Completed!
==============================
875, 875, 4
Adaptive temp step = 100
875
Start running job (temp, id) 875 1100 ...
Using scale from current temperature folder: 1.08
==============================
Iteration 1
Current scale = 1.08
Pressure = 3044.379112
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 875 1200 ...
Using scale from current temperature folder: 1.08
==============================
Iteration 1
Current scale = 1.08
Pressure = 2744.599255
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 875 1300 ...
Using scale from current temperature folder: 1.08
==============================
Iteration 1
Current scale = 1.08
Pressure = 3091.475450
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/summary.out
Collected 12 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 7
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
750 | 4 | 0 | 4
875 | 0 | 4 | 4
1000 | 0 | 1 | 1
1500 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 812.05 K
Uncertainty = 34.16 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 811.72445851445491 33.983563401570400
500 1 0 1
750 4 0 4
875 0 4 4
1000 0 1 1
1500 0 1 1
2000 0 1 1
current fit
1 811.72445851445491 33.983563401570400
possibilities:
current fit
0 811.72445851445491 33.983563401570400
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg
------ ---------------- ---------------- ----------- ------------------- ------------ ------------ ---------- ------------------ ------
1000/1 -3.425048 0.125478 978.386563 32.047294 580.768124 0.00000344 up 6.350e-05 P1 (1)
1500/1 -3.355064 0.191607 1494.010755 34.483701 2961.223546 0.00000272 up 8.740e-05 P1 (1)
2000/1 -3.293082 0.255772 1994.317550 36.802914 3082.738915 0.00000170 up 2.650e-04 P1 (1)
500/1 -3.597580 0.063935 498.521145 25.009636 -632.065339 0.00000020 up 5.810e-08 P1 (1)
750/1 -3.541947 0.096596 753.185870 27.287256 -2887.601257 -0.00000254 down 8.190e-08 P1 (1)
750/2 -3.551139 0.095861 747.454923 26.516156 -177.204246 -0.00000256 down 2.780e-08 P1 (1)
750/3 -3.549856 0.095130 741.752909 26.714303 -869.674256 -0.00000241 down 2.280e-08 P1 (1)
750/4 -3.536704 0.095591 745.344109 27.559414 -2760.773846 -0.00000355 down 1.530e-07 P1 (1)
875/1 -3.451654 0.111325 868.032718 30.891025 915.859780 0.00000322 up 2.630e-05 P1 (1)
875/2 -3.473847 0.111384 868.486803 29.395995 2373.182090 0.00000584 up 2.470e-05 P1 (1)
875/3 -3.446018 0.111658 870.626436 31.136279 595.678865 0.00000477 up 6.610e-05 P1 (1)
875/4 -3.445628 0.110844 864.277263 31.452376 1160.954030 0.00000380 up 4.610e-05 P1 (1)
======================================================================================================================================================
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/summary.out
Collected 12 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 7
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
750 | 4 | 0 | 4
875 | 0 | 4 | 4
1000 | 0 | 1 | 1
1500 | 0 | 1 | 1
2000 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 811.90 K
Uncertainty = 34.04 K
====================================
Wrote /data/qhong7/qhong7/sluschi_auto/2641fff9-65b7-4c2d-800a-b73f0fd786f9/NaCl/Dir_lammps/cost_table.out
Collected 45 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 12
Total log files (incl. subruns) = 45
Total wall time = 2:22:58
Total seconds = 8578
Total GPU hours = 2.38
====================================
=== PBE correction ===
N rows with PBE energy = 8
MT_LMP = 811.8966802932663
STD_LMP = 34.04021154130798
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -3.54731781
PBE_energy_eV_per_atom = -3.23598833
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -3.45068258
PBE_energy_eV_per_atom = -3.11539695
DH_LMP_raw_PBE = 0.09663523 eV/atom
DH_LMP_PBE = 0.07681192 eV/atom
DH_PBE = 0.10076807 eV/atom
Cp_solid_PBE = 1.71398750e-04 eV/atom/K
Cp_liquid_PBE = 1.45774332e-04 eV/atom/K
Cp_avg_PBE = 1.58586541e-04 eV/atom/K
DeltaT_PBE = 125.00 K
DH_raw_PBE = 0.12059138 eV/atom
MT_PBE = 1065.11154449 K
Na1 Cl1 1.0 3.4220150000000000 0.0000000000000000 1.9757020000000001 1.1406710000000000 3.2263060000000001 1.9757020000000001 0.0000000000000000 0.0000000000000000 3.9514019999999999 Na Cl 1 1 direct 0.0000000000000000 0.0000000000000000 0.0000000000000000 Na 0.5000000000000000 0.5000000000000000 0.5000000000000000 Cl
No output files have been received yet.