| Method / sample set | ΔH | ΔS estimate |
|---|---|---|
| uMLIP (PBE sample set) |
0.169199 ± 0.00262 eV/atom
16.3252 ± 0.253 kJ/mol of atoms
|
0.000117714 ± 3.33e-06
eV/(atom K)
11.3576 ± 0.321 J/(mol of atoms K)
|
| PBE |
0.147378 ± 0.00244 eV/atom
14.2198 ± 0.236 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
11.3576 ± 0.321 J/(mol of atoms K)
|
| uMLIP (R2SCAN sample set) |
0.169199 ± 0.00262 eV/atom
16.3252 ± 0.253 kJ/mol of atoms
|
0.000117714 ± 3.33e-06
eV/(atom K)
11.3576 ± 0.321 J/(mol of atoms K)
|
| R2SCAN |
0.167638 ± 0.00239 eV/atom
16.1746 ± 0.23 kJ/mol of atoms
|
Inherited from matched uMLIP estimate
11.3576 ± 0.321 J/(mol of atoms K)
|
ΔH is the liquid-minus-solid value reported by the existing correction workflow. Each uMLIP row uses the sample set matched to that DFT method. Uncertainties are standard errors; — means unavailable.
ΔS is estimated as ΔHuMLIP/Tm,uMLIP. Its propagated uncertainty assumes these two quantities are independent. The current PBE/R2SCAN correction inherits this entropy estimate; it is not an independently calculated DFT entropy.
| Sample set | Cp,solid | Cp,liquid |
|---|---|---|
| uMLIP (PBE sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
| uMLIP (R2SCAN sample set) |
— J/(mol of atoms K)
— eV/(atom K)
|
— J/(mol of atoms K)
— eV/(atom K)
|
Values reported in SLUSCHI.out by the correction workflow. These are uMLIP potential-energy–temperature slopes for the PBE/R2SCAN sample sets, not full thermodynamic heat capacities or independent DFT heat capacities. The workflow may substitute the other phase's slope when one is unavailable. Uncertainties are not reported; — means unavailable.
| Vsolid [ų/atom] | Vliquid [ų/atom] | ΔV [ų/atom] |
|---|---|---|
| — | — | — |
=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
4.3814397400000002 0.0000000000000000 -10.118499790000001
9.4931187700000006 -4.1308621199999997 3.7944374399999998
-3.6512014500000003 -10.327155299999999 -1.2648124999999997
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
11.026 11.026 11.026 88.492 91.508 88.492
In UNIT-cell, number of atoms: 1 total: 1
Inverse Matrix is:
3.3162420292430300E-002 7.8029223686747626E-002 -3.1211689474699052E-002
-1.3793796736934860E-003 -3.1725625182295970E-002 -8.4141836881366117E-002
-8.4469127992753884E-002 3.3787651197101552E-002 -1.3515060478840622E-002
In SUPER-cell, number of atoms: 117 total: 117
POSCAR_STRCT atoms = 117
Accepted radius = 11 with 117 atoms
====================================================================================================
=== SLUSCHI fit-first-1-guard1; source: /data/qhong7/qhong7/sluschi_lammps/src/ ===
/data/qhong7/qhong7/sluschi_auto/250ca19b-f3b4-4826-9225-4e4de793356f/Cu/Dir_lammps
['Cu']
elements: ['Cu']
counts: [117]
solid atom IDs: 1:117
liquid atom IDs: 118:234
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 500/1, step_param=1000
Pressure trial 1: scale=1.0
Pressure = 7760.51093
Pressure trial 2: scale=1.01
Pressure = -29058.5779
Pressure trial 3: scale=1.0050000000000001
Pressure = -11833.43532
Pressure trial 4: scale=1.0000000000000002
Pressure = 7760.43916
Pressure trial 5: scale=1.0025000000000002
Pressure = -2290.28753
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1000 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1000/1, step_param=1000
Pressure trial 1: scale=1.0025000000000002
Pressure = 41605.2945
Pressure trial 2: scale=1.0125000000000002
Pressure = 2660.536457
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1000 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
1500 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1500/1, step_param=1000
Pressure trial 1: scale=1.0125000000000002
Pressure = 58566.5461
Pressure trial 2: scale=1.0225000000000002
Pressure = 25571.18465
Pressure trial 3: scale=1.0325000000000002
Pressure = -1073.153514
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1500 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Initial scan stopped at 1500 K: confirmed liquid. Fitting before further MD.
Wrote summary.csv and summary.out for 3 trajectories
Wrote phase_pred.csv: {'solid': 2, 'liquid': 1}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
FIT NOW: reporting the partial batch before further MD.
=== running MPFit ===
Melting temperature and std error: 1017.1957800000000 5200.0397177313007
500 1 0 1
1000 1 0 1
1500 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 1250.0000000000000 K
1250, 1250, 1
Adaptive temp step = 100
1250 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1250/1, step_param=1000
Pressure trial 1: scale=1.0125000000000002
Pressure = 48198.8571
Pressure trial 2: scale=1.0225000000000002
Pressure = 12859.32902
Pressure trial 3: scale=1.0325000000000002
Pressure = -15927.51267
Pressure trial 4: scale=1.0275000000000003
Pressure = -1589.849714
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1250 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 4 trajectories
Wrote phase_pred.csv: {'solid': 3, 'liquid': 1}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 1275.4312499999999 4946.2759772000827
500 1 0 1
1000 1 0 1
1250 1 0 1
1500 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 1375.0000000000000 K
1375, 1375, 1
Adaptive temp step = 100
1375 K: 0/1 usable completed; 0 genuinely resolved; no replacement attempts
Starting NEW trajectory 1375/1, step_param=1000
Pressure trial 1: scale=1.0325000000000002
Pressure = -9721.554198
Pressure trial 2: scale=1.0275000000000003
Pressure = 4262.521008
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1375 K: 1/1 usable completed; 1 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 5 trajectories
Wrote phase_pred.csv: {'solid': 4, 'liquid': 1}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 1390.0826049999998 4733.4605705440690
500 1 0 1
1000 1 0 1
1250 1 0 1
1375 1 0 1
1500 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 1375.0000000000000 K
next job: 4 MD duplicate(s) at 1500.0000000000000 K
1375, 1375, 4
Adaptive temp step = 100
1375 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 1375/2, step_param=1100
Pressure trial 1: scale=1.0275000000000003
Pressure = 6410.96853
Pressure trial 2: scale=1.0375000000000003
Pressure = -21453.8287
Pressure trial 3: scale=1.0325000000000004
Pressure = -6703.152831
Pressure trial 4: scale=1.0275000000000005
Pressure = 3622.420545
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1375 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 1375/3, step_param=1200
Pressure trial 1: scale=1.0275000000000005
Pressure = 1977.55601
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1375 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 1375/4, step_param=1300
Pressure trial 1: scale=1.0275000000000005
Pressure = 6405.866805
Pressure trial 2: scale=1.0375000000000005
Pressure = -17748.52506
Pressure trial 3: scale=1.0325000000000006
Pressure = -10443.11018
Pressure trial 4: scale=1.0275000000000007
Pressure = 519.32272
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: solid
1375 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
1500, 1500, 4
Adaptive temp step = 100
1500 K: 1/4 usable completed; 1 genuinely resolved; no replacement attempts
Starting NEW trajectory 1500/2, step_param=1100
Pressure trial 1: scale=1.0325000000000002
Pressure = 3303.791888
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1500 K: 2/4 usable completed; 2 genuinely resolved; no replacement attempts
Starting NEW trajectory 1500/3, step_param=1200
Pressure trial 1: scale=1.0325000000000002
Pressure = -4950.2801
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1500 K: 3/4 usable completed; 3 genuinely resolved; no replacement attempts
Starting NEW trajectory 1500/4, step_param=1300
Pressure trial 1: scale=1.0325000000000002
Pressure = -3791.982739
Production: at most 8 blocks of 10000 steps, including the first
Completed! Phase: liquid
1500 K: 4/4 usable completed; 4 genuinely resolved; no replacement attempts
Wrote summary.csv and summary.out for 11 trajectories
Wrote phase_pred.csv: {'solid': 7, 'liquid': 4}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
=== running MPFit ===
Melting temperature and std error: 1437.3766981793367 33.970156448317113
500 1 0 1
1000 1 0 1
1250 1 0 1
1375 4 0 4
1500 0 4 4
current fit
1 1437.3766981793367 33.970156448317113
possibilities:
current fit
0 1437.3766981793367 33.970156448317113
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg phase left_phase right_phase left_D [cm^2/s] right_D [cm^2/s] phase_reason last_md_step phase_check maise_half maise_quarter maise_eighth
1000/1 -4.172226 0.127034 986.994244 11.964049 7167.859525 -0.00000101 down 2.32125647e-08 Fm-3m (225) solid solid solid 0.00000000e+00 6.58954084e-08 Both original halves agree 11100 RESOLVED N/A N/A N/A
1250/1 -4.139694 0.162497 1262.529800 12.005122 20216.279250 -0.00000711 down 0.00000000e+00 Fm-3m (225) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11100 RESOLVED N/A N/A N/A
1375/1 -4.099893 0.179252 1392.701660 12.386474 -4151.526228 -0.00001552 down 0.00000000e+00 Fm-3m (225) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11100 RESOLVED N/A N/A N/A
1375/2 -4.102491 0.177542 1379.420330 12.349514 -770.091252 -0.00001276 down 0.00000000e+00 Fm-3m (225) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11200 RESOLVED N/A N/A N/A
1375/3 -4.104492 0.176965 1374.935985 12.280015 5911.045495 -0.00001106 down 0.00000000e+00 Fm-3m (225) solid solid solid 0.00000000e+00 0.00000000e+00 Both original halves agree 11300 RESOLVED N/A N/A N/A
1375/4 -4.107758 0.176204 1369.026025 12.222004 11107.876680 -0.00001084 down 1.82444988e-07 Fm-3m (225) solid solid solid 1.64298447e-07 2.00591529e-07 Both original halves agree 11400 RESOLVED N/A N/A N/A
1500/1 -3.933785 0.192540 1495.944190 13.221369 -3907.639853 0.00000583 up 4.35894599e-05 P1 (1) liquid liquid liquid 5.07853254e-05 3.63935943e-05 Both original halves agree 11100 RESOLVED N/A N/A N/A
1500/2 -3.938246 0.193016 1499.647690 13.256556 -9496.601175 0.00000235 up 3.30237086e-05 P1 (1) liquid liquid liquid 2.84078985e-05 3.76395187e-05 Both original halves agree 11200 RESOLVED N/A N/A N/A
1500/3 -3.939903 0.192593 1496.356575 13.194980 -6029.579651 0.00000478 up 3.46591356e-05 P1 (1) liquid liquid liquid 3.90897351e-05 3.02285360e-05 Both original halves agree 11300 RESOLVED N/A N/A N/A
1500/4 -3.952024 0.192727 1497.400965 13.088109 -1436.251021 0.00000644 up 3.09800408e-05 P1 (1) liquid liquid liquid 3.56083579e-05 2.63517237e-05 Both original halves agree 11400 RESOLVED N/A N/A N/A
500/1 -4.246392 0.064710 502.768675 11.714000 -2045.007751 0.00000020 up 0.00000000e+00 Fm-3m (225) solid solid solid 0.00000000e+00 1.23829493e-08 Both original halves agree 11100 RESOLVED N/A N/A N/A
======================================================================================================================================================
Wrote summary.csv and summary.out for 11 trajectories
Wrote phase_pred.csv: {'solid': 7, 'liquid': 4}
Wrote jobs_results.out (weighted counts); 0 unresolved trajectories
Wrote /data/qhong7/qhong7/sluschi_auto/250ca19b-f3b4-4826-9225-4e4de793356f/Cu/Dir_lammps/cost_table.out
Collected 39 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 11
Total log files (incl. subruns) = 39
Total wall time = 4:49:16
Total seconds = 17356
Total GPU hours = 4.82
====================================
=== DFT corrections begin ===
=== PBE correction ===
PBE_METHOD = PBE
N rows with PBE energy = 8
MT_LMP = 1437.3766981793367
STD_LMP = 33.97015644831711
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -4.10791674
PBE_energy_eV_per_atom = -3.53681856
N_solid_PBE = 4
SEM_lammps_solid_PBE = 1.13555962e-03 eV/atom
SEM_PBE_solid = 1.65754773e-03 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -3.93871796
PBE_energy_eV_per_atom = -3.38944033
N_liquid_PBE = 4
SEM_lammps_liquid_PBE = 2.36431148e-03 eV/atom
SEM_PBE_liquid = 1.79330600e-03 eV/atom
DH_LMP_raw_PBE = 0.16919878 eV/atom
DH_LMP_PBE = 0.16919878 eV/atom
DH_PBE = 0.14737823 eV/atom
STD_DH_LMP_PBE = 2.62287331e-03 eV/atom
STD_DH_PBE = 2.44200960e-03 eV/atom
COV_DH_PBE_LMP = 5.03409636e-06 (eV/atom)^2
DH_raw_PBE = 0.14737823 eV/atom
MT_PBE = 1252.00685020 K
STD_PBE = 32.39867154 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 8
MT_LMP = 1437.3766981793367
STD_LMP = 33.97015644831711
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = -4.10791674
R2SCAN_energy_eV_per_atom = -10.61616688
N_solid_R2SCAN = 4
SEM_lammps_solid_R2SCAN = 1.13555962e-03 eV/atom
SEM_R2SCAN_solid = 1.12371076e-03 eV/atom
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = -3.93871796
R2SCAN_energy_eV_per_atom = -10.44852907
N_liquid_R2SCAN = 4
SEM_lammps_liquid_R2SCAN = 2.36431148e-03 eV/atom
SEM_R2SCAN_liquid = 2.10801539e-03 eV/atom
DH_LMP_raw_R2SCAN = 0.16919878 eV/atom
DH_LMP_R2SCAN = 0.16919878 eV/atom
DH_R2SCAN = 0.16763781 eV/atom
STD_DH_LMP_R2SCAN = 2.62287331e-03 eV/atom
STD_DH_R2SCAN = 2.38881869e-03 eV/atom
COV_DH_R2SCAN_LMP = 6.24842624e-06 (eV/atom)^2
DH_raw_R2SCAN = 0.16763781 eV/atom
MT_R2SCAN = 1424.11597205 K
STD_R2SCAN = 33.74029116 K
=== DFT corrections end ===
Cu1 1.0 2.1907198700000001 0.0000000000000000 1.2648124800000000 0.7302402900000000 2.0654310599999999 1.2648124800000000 -0.0000000000000000 -0.0000000000000000 2.5296249500000001 Cu 1 direct -0.0000000000000000 -0.0000000000000000 -0.0000000000000000 Cu
No output files have been received yet.