=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
6.8687330800000002 2.7753876100000001 -8.4978502599999999
7.8499806700000008 -2.7753876100000001 6.7982802299999996
-0.98124756999999985 -11.101550440000000 -5.0987101800000003
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
11.274 10.749 12.256 95.032 87.604 95.471
In UNIT-cell, number of atoms: 1 1 total: 2
Inverse Matrix is:
6.0890267440713533E-002 7.3709270902046709E-002 -3.2047508653332939E-003
2.2661008480722791E-002 -2.9459310806008242E-002 -7.7047428306992641E-002
-6.1058727529569465E-002 4.9957140706011371E-002 -2.7753967058895213E-002
In SUPER-cell, number of atoms: 53 53 total: 106
POSCAR_STRCT atoms = 106
Accepted radius = 11 with 106 atoms
====================================================================================================
/data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps
['Ca', 'O']
elements: ['Ca', 'O']
counts: [53, 53]
solid atom IDs: 1:106
liquid atom IDs: 107:212
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500
Start running job (temp, id) 500 1000 ...
Using closest available scale or default: 1.0
==============================
Iteration 1
Current scale = 1.0
Pressure = 13388.656000
New scale = 1.01
==============================
Iteration 2
Current scale = 1.01
Pressure = -11989.652600
Step reduced to 0.005
New scale = 1.0050000000000001
==============================
Iteration 3
Current scale = 1.0050000000000001
Pressure = 145.125669
Converged!
Now running full trajectory...
Completed!
==============================
1000
Start running job (temp, id) 1000 1000 ...
Using closest available scale or default: 1.0050000000000001
==============================
Iteration 1
Current scale = 1.0050000000000001
Pressure = 20365.036500
New scale = 1.0150000000000001
==============================
Iteration 2
Current scale = 1.0150000000000001
Pressure = -5617.362913
Step reduced to 0.005
New scale = 1.0100000000000002
==============================
Iteration 3
Current scale = 1.0100000000000002
Pressure = 6768.648660
Step reduced to 0.0025
New scale = 1.0125000000000002
==============================
Iteration 4
Current scale = 1.0125000000000002
Pressure = 428.581369
Converged!
Now running full trajectory...
Completed!
==============================
1500
Start running job (temp, id) 1500 1000 ...
Using closest available scale or default: 1.0125000000000002
==============================
Iteration 1
Current scale = 1.0125000000000002
Pressure = 36568.891900
New scale = 1.0225000000000002
==============================
Iteration 2
Current scale = 1.0225000000000002
Pressure = 15780.955274
New scale = 1.0325000000000002
==============================
Iteration 3
Current scale = 1.0325000000000002
Pressure = -858.390090
Converged!
Now running full trajectory...
Completed!
==============================
2000
Start running job (temp, id) 2000 1000 ...
Using closest available scale or default: 1.0325000000000002
==============================
Iteration 1
Current scale = 1.0325000000000002
Pressure = 35370.888600
New scale = 1.0425000000000002
==============================
Iteration 2
Current scale = 1.0425000000000002
Pressure = 17861.664030
New scale = 1.0525000000000002
==============================
Iteration 3
Current scale = 1.0525000000000002
Pressure = 4901.168120
Converged!
Now running full trajectory...
Completed!
==============================
500, 500, 1
Adaptive temp step = 100
500
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/summary.out
Collected 4 folders
Wrote phase_pred.csv
Label counts:
solid = 4
liquid = 0
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2044.93 K
Uncertainty = 6627.13 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2044.9288524999999 6617.8151688077041
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2800.0 K
2800, 2800, 1
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1000 ...
Using closest available scale or default: 1.0525000000000002
==============================
Iteration 1
Current scale = 1.0525000000000002
Pressure = 43701.701950
New scale = 1.0625000000000002
==============================
Iteration 2
Current scale = 1.0625000000000002
Pressure = 26160.717400
New scale = 1.0725000000000002
==============================
Iteration 3
Current scale = 1.0725000000000002
Pressure = 10609.950090
New scale = 1.0825000000000002
==============================
Iteration 4
Current scale = 1.0825000000000002
Pressure = 2248.371120
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/summary.out
Collected 5 folders
Wrote phase_pred.csv
Label counts:
solid = 4
liquid = 1
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2050.41 K
Uncertainty = 10797.52 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2050.4090095999995 10795.277446239499
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2400.0000000000000 K
2400, 2400, 1
Adaptive temp step = 100
2400
Start running job (temp, id) 2400 1000 ...
Using closest available scale or default: 1.0525000000000002
==============================
Iteration 1
Current scale = 1.0525000000000002
Pressure = 25780.241440
New scale = 1.0625000000000002
==============================
Iteration 2
Current scale = 1.0625000000000002
Pressure = 691.691233
Converged!
Now running full trajectory...
=== DFT corrections begin ===
=== PBE correction ===
N rows with PBE energy = 8
MT_LMP = 2598.8642396667187
STD_LMP = 108.79462069558633
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -6.06654186
PBE_energy_eV_per_atom = -6.04067006
N_solid_PBE = 4
SEM_lammps_solid_PBE = 1.23793474e-02 eV/atom
SEM_PBE_solid = 1.23395266e-02 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -5.68719175
PBE_energy_eV_per_atom = -5.66253031
N_liquid_PBE = 4
SEM_lammps_liquid_PBE = 3.67690941e-02 eV/atom
SEM_PBE_liquid = 3.77634612e-02 eV/atom
DH_LMP_raw_PBE = 0.37935012 eV/atom
DH_LMP_PBE = 0.37935012 eV/atom
DH_PBE = 0.37813975 eV/atom
STD_DH_LMP_PBE = 3.87970943e-02 eV/atom
STD_DH_PBE = 3.97283642e-02 eV/atom
COV_DH_PBE_LMP = 1.54121448e-03 (eV/atom)^2
DH_raw_PBE = 0.37813975 eV/atom
MT_PBE = 2590.57220191 K
STD_PBE = 108.74430842 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 8
MT_LMP = 2598.8642396667187
STD_LMP = 108.79462069558633
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = -6.06654186
R2SCAN_energy_eV_per_atom = -9.31607571
N_solid_R2SCAN = 4
SEM_lammps_solid_R2SCAN = 1.23793474e-02 eV/atom
SEM_R2SCAN_solid = 1.38998444e-02 eV/atom
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = -5.68719175
R2SCAN_energy_eV_per_atom = -8.88517259
N_liquid_R2SCAN = 4
SEM_lammps_liquid_R2SCAN = 3.67690941e-02 eV/atom
SEM_R2SCAN_liquid = 4.16462739e-02 eV/atom
DH_LMP_raw_R2SCAN = 0.37935012 eV/atom
DH_LMP_R2SCAN = 0.37935012 eV/atom
DH_R2SCAN = 0.43090312 eV/atom
STD_DH_LMP_R2SCAN = 3.87970943e-02 eV/atom
STD_DH_R2SCAN = 4.39046444e-02 eV/atom
COV_DH_R2SCAN_LMP = 1.70227591e-03 (eV/atom)^2
DH_raw_R2SCAN = 0.43090312 eV/atom
MT_R2SCAN = 2952.04522303 K
STD_R2SCAN = 124.05697912 K
=== DFT corrections end ===
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/summary.out
Collected 6 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 1
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2400 | 1 | 0 | 1
2800 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2452.14 K
Uncertainty = 10458.11 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2452.1437833000000 10442.617391517017
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 2400.0000000000000 K
next job: 4 MD duplicate(s) at 2800.0000000000000 K
2400, 2400, 4
Adaptive temp step = 100
2400
Start running job (temp, id) 2400 1100 ...
Using scale from current temperature folder: 1.0625000000000002
==============================
Iteration 1
Current scale = 1.0625000000000002
Pressure = 14323.725410
New scale = 1.0725000000000002
==============================
Iteration 2
Current scale = 1.0725000000000002
Pressure = 1601.731710
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2400 1200 ...
Using scale from current temperature folder: 1.0725000000000002
==============================
Iteration 1
Current scale = 1.0725000000000002
Pressure = 3045.076860
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2400 1300 ...
Using scale from current temperature folder: 1.0725000000000002
==============================
Iteration 1
Current scale = 1.0725000000000002
Pressure = 1943.967564
Converged!
Now running full trajectory...
Completed!
==============================
2800, 2800, 4
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1100 ...
Using scale from current temperature folder: 1.0825000000000002
==============================
Iteration 1
Current scale = 1.0825000000000002
Pressure = 5965.784240
New scale = 1.0925000000000002
==============================
Iteration 2
Current scale = 1.0925000000000002
Pressure = -252.006013
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2800 1200 ...
Using scale from current temperature folder: 1.0925000000000002
==============================
Iteration 1
Current scale = 1.0925000000000002
Pressure = -491.086110
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2800 1300 ...
Using scale from current temperature folder: 1.0925000000000002
==============================
Iteration 1
Current scale = 1.0925000000000002
Pressure = 4035.748470
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/summary.out
Collected 12 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 4
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2400 | 4 | 0 | 4
2800 | 0 | 4 | 4
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2598.25 K
Uncertainty = 108.94 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2598.8317272219729 108.99796348518312
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 4 0 4
2800 0 4 4
current fit
1 2598.8317272219729 108.99796348518312
possibilities:
current fit
0 2598.8317272219729 108.99796348518312
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg
------ ---------------- ---------------- ----------- ------------------- ------------- ------------ ---------- ------------------ ------
1000/1 -6.301716 0.127996 994.916343 14.865280 -323.135589 -0.00000013 down 3.500e-08 P1 (1)
1500/1 -6.238092 0.195546 1519.982615 15.032796 10247.682950 -0.00000234 down 1.360e-07 P1 (1)
2000/1 -6.152008 0.254967 1981.857900 15.491384 9314.525350 -0.00000958 down 1.670e-07 P1 (1)
2400/1 -6.070547 0.310742 2415.397125 16.207090 -386.984133 -0.00001194 down 7.350e-08 P1 (1)
2400/2 -6.069121 0.311828 2423.841655 16.230554 -843.552780 -0.00001657 down 9.620e-08 P1 (1)
2400/3 -6.055676 0.310798 2415.830790 16.399482 -6421.428621 -0.00001746 down 8.690e-08 P1 (1)
2400/4 -6.043375 0.310376 2412.553735 16.598061 -11120.722413 -0.00001711 down 2.910e-07 P1 (1)
2800/1 -5.806689 0.367518 2856.720400 18.696099 -13636.682406 -0.00000657 down 1.360e-05 P1 (1)
2800/2 -5.681745 0.355899 2766.405470 18.962711 19191.851140 0.00001812 up 1.040e-04 P1 (1)
2800/3 -5.659958 0.359917 2797.632030 19.790060 10326.957005 0.00000601 up 8.780e-05 P1 (1)
2800/4 -5.660393 0.359346 2793.194255 19.923628 11376.495307 0.00000550 up 1.060e-04 P1 (1)
500/1 -6.372283 0.064297 499.779688 14.501708 534.345879 -0.00000010 down 1.430e-08 P1 (1)
======================================================================================================================================================
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/summary.out
Collected 12 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 4
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2400 | 4 | 0 | 4
2800 | 0 | 4 | 4
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2598.86 K
Uncertainty = 108.79 K
====================================
Wrote /data/qhong7/qhong7/sluschi_auto/15b188f5-c764-41ea-ade8-bc81ca94d32d/CaO/Dir_lammps/cost_table.out
Collected 39 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 12
Total log files (incl. subruns) = 39
Total wall time = 1:20:48
Total seconds = 4848
Total GPU hours = 1.35
====================================
Ca1 O1 1.0 2.9437427500000002 0.0000000000000000 1.6995700600000001 0.9812475800000000 2.7753876100000001 1.6995700600000001 0.0000000000000000 -0.0000000000000000 3.3991401099999998 Ca O 1 1 direct -0.0000000000000000 -0.0000000000000000 0.0000000000000000 Ca 0.5000000000000000 0.5000000000000000 0.5000000000000000 O
No output files have been received yet.