=======================================================================================================
Solid and Liquid in Ultra Small Coexistence with Hovering Interfaces (SLUSCHI)
Developed and maintained by Qi-Jun Hong, with early research support from Axel van de Walle (2014-2020)
=======================================================================================================
Generating solid with radius = 11
*** Generate a supercell from the current unitcell ***
The supercell is:
-3.2000000000000001E-007 -1.1999999999999999E-007 -10.606063000000001
-1.1310000000000000E-005 10.224399160000001 -8.8000000000000004E-007
10.224412870000000 -1.1300000000000000E-005 2.9999999999999999E-007
|a|,|b|,|c|,theta(bc),theta(ac),theta(ab):
10.606 10.224 10.224 90.000 90.000 90.000
In UNIT-cell, number of atoms: 30 total: 30
Inverse Matrix is:
2.7664782869147422E-009 1.0809416954153429E-007 9.7805127073396766E-002
-8.1150371045105617E-009 9.7805258221278349E-002 1.0818982781217111E-007
-9.4285693004086429E-002 -1.1065996474552014E-009 -2.9509209634400913E-009
In SUPER-cell, number of atoms: 60 total: 60
POSCAR_STRCT atoms = 60
Accepted radius = 11 with 60 atoms
====================================================================================================
/data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps
['Ta']
elements: ['Ta']
counts: [60]
solid atom IDs: 1:60
liquid atom IDs: 61:120
Original Tm = 1000.0
New temp = 500
New temp_end = 2000
500, 2000, 1
Adaptive temp step = 500
500
Start running job (temp, id) 500 1000 ...
Using closest available scale or default: 1.0
==============================
Iteration 1
Current scale = 1.0
Pressure = -6936.020020
Step reduced to 0.005
New scale = 0.995
==============================
Iteration 2
Current scale = 0.995
Pressure = 15476.509130
Step reduced to 0.0025
New scale = 0.9974999999999999
==============================
Iteration 3
Current scale = 0.9974999999999999
Pressure = 4107.560650
Converged!
Now running full trajectory...
Completed!
==============================
1000
Start running job (temp, id) 1000 1000 ...
Using closest available scale or default: 0.9974999999999999
==============================
Iteration 1
Current scale = 0.9974999999999999
Pressure = 21712.517100
New scale = 1.0074999999999998
==============================
Iteration 2
Current scale = 1.0074999999999998
Pressure = -24860.618100
Step reduced to 0.005
New scale = 1.0025
==============================
Iteration 3
Current scale = 1.0025
Pressure = -2097.005951
Converged!
Now running full trajectory...
Completed!
==============================
1500
Start running job (temp, id) 1500 1000 ...
Using closest available scale or default: 1.0025
==============================
Iteration 1
Current scale = 1.0025
Pressure = 13592.411700
New scale = 1.0125
==============================
Iteration 2
Current scale = 1.0125
Pressure = -30566.610000
Step reduced to 0.005
New scale = 1.0075
==============================
Iteration 3
Current scale = 1.0075
Pressure = -9450.920860
New scale = 1.0025000000000002
==============================
Iteration 4
Current scale = 1.0025000000000002
Pressure = 13592.690920
Step reduced to 0.0025
New scale = 1.0050000000000001
==============================
Iteration 5
Current scale = 1.0050000000000001
Pressure = 1810.754707
Converged!
Now running full trajectory...
Completed!
==============================
2000
Start running job (temp, id) 2000 1000 ...
Using closest available scale or default: 1.0050000000000001
==============================
Iteration 1
Current scale = 1.0050000000000001
Pressure = 38163.792800
New scale = 1.0150000000000001
==============================
Iteration 2
Current scale = 1.0150000000000001
Pressure = -4597.825470
Converged!
Now running full trajectory...
Completed!
==============================
500, 500, 1
Adaptive temp step = 100
500
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/summary.out
Collected 4 folders
Wrote phase_pred.csv
Label counts:
solid = 4
liquid = 0
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2044.93 K
Uncertainty = 6628.47 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2044.9288524999999 6630.6344239735990
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2800.0 K
2800, 2800, 1
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1000 ...
Using closest available scale or default: 1.0150000000000001
==============================
Iteration 1
Current scale = 1.0150000000000001
Pressure = 34776.960500
New scale = 1.0250000000000001
==============================
Iteration 2
Current scale = 1.0250000000000001
Pressure = -5159.968864
Step reduced to 0.005
New scale = 1.0200000000000002
==============================
Iteration 3
Current scale = 1.0200000000000002
Pressure = 13815.964750
Step reduced to 0.0025
New scale = 1.0225000000000002
==============================
Iteration 4
Current scale = 1.0225000000000002
Pressure = 4602.038520
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/summary.out
Collected 5 folders
Wrote phase_pred.csv
Label counts:
solid = 4
liquid = 1
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2800 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2050.41 K
Uncertainty = 10805.30 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2050.4090095999995 10782.845232225192
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 1 MD duplicate(s) at 2400.0000000000000 K
2400, 2400, 1
Adaptive temp step = 100
2400
Start running job (temp, id) 2400 1000 ...
Using closest available scale or default: 1.0150000000000001
==============================
Iteration 1
Current scale = 1.0150000000000001
Pressure = 13276.776300
New scale = 1.0250000000000001
==============================
Iteration 2
Current scale = 1.0250000000000001
Pressure = -25901.310600
Step reduced to 0.005
New scale = 1.0200000000000002
==============================
Iteration 3
Current scale = 1.0200000000000002
Pressure = -6611.156663
New scale = 1.0150000000000003
==============================
Iteration 4
Current scale = 1.0150000000000003
Pressure = 13275.993850
Step reduced to 0.0025
New scale = 1.0175000000000003
==============================
Iteration 5
Current scale = 1.0175000000000003
Pressure = 3193.522179
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/summary.out
Collected 6 folders
Wrote phase_pred.csv
Label counts:
solid = 5
liquid = 1
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2400 | 1 | 0 | 1
2800 | 0 | 1 | 1
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2452.14 K
Uncertainty = 10407.88 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2452.1437833000000 10423.547959285383
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 1 0 1
2800 0 1 1
=== Find next job to run ===
next job: 4 MD duplicate(s) at 2400.0000000000000 K
next job: 4 MD duplicate(s) at 2800.0000000000000 K
2400, 2400, 4
Adaptive temp step = 100
2400
Start running job (temp, id) 2400 1100 ...
Using scale from current temperature folder: 1.0175000000000003
==============================
Iteration 1
Current scale = 1.0175000000000003
Pressure = 382.712042
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2400 1200 ...
Using scale from current temperature folder: 1.0175000000000003
==============================
Iteration 1
Current scale = 1.0175000000000003
Pressure = 7801.318169
New scale = 1.0275000000000003
==============================
Iteration 2
Current scale = 1.0275000000000003
Pressure = -26509.998200
Step reduced to 0.005
New scale = 1.0225000000000004
==============================
Iteration 3
Current scale = 1.0225000000000004
Pressure = -9744.491777
New scale = 1.0175000000000005
==============================
Iteration 4
Current scale = 1.0175000000000005
Pressure = 7672.809940
Step reduced to 0.0025
New scale = 1.0200000000000005
==============================
Iteration 5
Current scale = 1.0200000000000005
Pressure = -1237.549650
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2400 1300 ...
Using scale from current temperature folder: 1.0200000000000005
==============================
Iteration 1
Current scale = 1.0200000000000005
Pressure = -3294.596450
Converged!
Now running full trajectory...
=== DFT corrections begin ===
=== PBE correction ===
N rows with PBE energy = 8
MT_LMP = 2598.432900186378
STD_LMP = 108.64817554646807
SOLID (PBE present only):
lammps_poteng_eV_per_atom = -11.45198875
PBE_energy_eV_per_atom = -11.45648000
N_solid_PBE = 4
SEM_lammps_solid_PBE = 1.88225833e-02 eV/atom
SEM_PBE_solid = 1.80855207e-02 eV/atom
LIQUID (PBE present only):
lammps_poteng_eV_per_atom = -11.22764375
PBE_energy_eV_per_atom = -11.23354480
N_liquid_PBE = 4
SEM_lammps_liquid_PBE = 7.21231080e-03 eV/atom
SEM_PBE_liquid = 7.52793679e-03 eV/atom
DH_LMP_raw_PBE = 0.22434500 eV/atom
DH_LMP_PBE = 0.22434500 eV/atom
DH_PBE = 0.22293519 eV/atom
STD_DH_LMP_PBE = 2.01570600e-02 eV/atom
STD_DH_PBE = 1.95896884e-02 eV/atom
COV_DH_PBE_LMP = 3.93209416e-04 (eV/atom)^2
DH_raw_PBE = 0.22293519 eV/atom
MT_PBE = 2582.10409425 K
STD_PBE = 110.11567099 K
=== R2SCAN correction ===
N rows with R2SCAN energy = 8
MT_LMP = 2598.432900186378
STD_LMP = 108.64817554646807
SOLID (R2SCAN present only):
lammps_poteng_eV_per_atom = -11.45198875
R2SCAN_energy_eV_per_atom = -48.20765751
N_solid_R2SCAN = 4
SEM_lammps_solid_R2SCAN = 1.88225833e-02 eV/atom
SEM_R2SCAN_solid = 1.92122097e-02 eV/atom
LIQUID (R2SCAN present only):
lammps_poteng_eV_per_atom = -11.22764375
R2SCAN_energy_eV_per_atom = -47.96451508
N_liquid_R2SCAN = 4
SEM_lammps_liquid_R2SCAN = 7.21231080e-03 eV/atom
SEM_R2SCAN_liquid = 7.61210412e-03 eV/atom
DH_LMP_raw_R2SCAN = 0.22434500 eV/atom
DH_LMP_R2SCAN = 0.22434500 eV/atom
DH_R2SCAN = 0.24314243 eV/atom
STD_DH_LMP_R2SCAN = 2.01570600e-02 eV/atom
STD_DH_R2SCAN = 2.06652639e-02 eV/atom
COV_DH_R2SCAN_LMP = 4.14353556e-04 (eV/atom)^2
DH_raw_R2SCAN = 0.24314243 eV/atom
MT_R2SCAN = 2816.15052023 K
STD_R2SCAN = 121.20815899 K
=== DFT corrections end ===
Completed!
==============================
2800, 2800, 4
Adaptive temp step = 100
2800
Start running job (temp, id) 2800 1100 ...
Using scale from current temperature folder: 1.0225000000000002
==============================
Iteration 1
Current scale = 1.0225000000000002
Pressure = -4923.023292
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2800 1200 ...
Using scale from current temperature folder: 1.0225000000000002
==============================
Iteration 1
Current scale = 1.0225000000000002
Pressure = -694.078230
Converged!
Now running full trajectory...
Completed!
==============================
Start running job (temp, id) 2800 1300 ...
Using scale from current temperature folder: 1.0225000000000002
==============================
Iteration 1
Current scale = 1.0225000000000002
Pressure = -4458.164926
Converged!
Now running full trajectory...
Completed!
==============================
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/summary.out
Collected 12 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 4
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2400 | 4 | 0 | 4
2800 | 0 | 4 | 4
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2598.63 K
Uncertainty = 109.41 K
====================================
jobs_to_run.out Jobs completed
=== running MPFit ===
Melting temperature and std error: 2598.5155408044093 109.03805713760804
500 1 0 1
1000 1 0 1
1500 1 0 1
2000 1 0 1
2400 4 0 4
2800 0 4 4
current fit
1 2598.5155408044093 109.03805713760804
possibilities:
current fit
0 2598.5155408044093 109.03805713760804
possibilities:
MP accuracy achieved. Stopping code...
summary.out
======================================================================================================================================================
folder poteng [eV/atom] kineng [eV/atom] temp [K] volume [Ang^3/atom] press [bar] energy_slope energy_dir diffusion [cm^2/s] spg
------ ---------------- ---------------- ----------- ------------------- ------------ ------------ ---------- ------------------ --------------
1000/1 -11.667279 0.127287 993.009404 19.079581 -357.452038 0.00000029 up 2.270e-09 P4_2/mnm (136)
1500/1 -11.602855 0.192100 1498.636795 19.288469 -1155.667655 0.00000008 up 1.170e-07
2000/1 -11.535045 0.257934 2012.233875 19.417055 6949.224430 -0.00000211 down 5.090e-07 P1 (1)
2400/1 -11.453209 0.301718 2353.809620 19.728089 1667.808458 -0.00002602 down 8.690e-08 P1 (1)
2400/2 -11.468364 0.308337 2405.440455 19.609448 9151.331295 -0.00001498 down 1.730e-06 P1 (1)
2400/3 -11.404758 0.312085 2434.686130 19.948216 -5569.849907 -0.00001730 down 2.410e-06 P1 (1)
2400/4 -11.466458 0.305865 2386.162270 19.655389 5572.327260 -0.00002017 down 5.090e-08 P1 (1)
2800/1 -11.216521 0.358749 2798.723825 20.379790 325.795057 0.00000297 up 3.590e-05 P1 (1)
2800/2 -11.219725 0.359365 2803.530035 20.305790 3147.391040 0.00000839 up 1.920e-05 P1 (1)
2800/3 -11.228783 0.358202 2794.455080 20.398642 -3341.080840 -0.00000501 down 2.010e-05 P1 (1)
2800/4 -11.232350 0.356511 2781.266955 20.377201 -2322.631689 -0.00000248 down 2.120e-05 P1 (1)
500/1 -11.731390 0.064325 501.820566 18.866058 1660.250352 -0.00000003 down 2.420e-09 P4_2/mnm (136)
======================================================================================================================================================
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/summary.csv
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/summary.out
Collected 12 folders
Wrote phase_pred.csv
Label counts:
solid = 8
liquid = 4
Wrote jobs_results.out
---------------------------------------------
Temp | Solid | Liquid | Total
---------------------------------------------
500 | 1 | 0 | 1
1000 | 1 | 0 | 1
1500 | 1 | 0 | 1
2000 | 1 | 0 | 1
2400 | 4 | 0 | 4
2800 | 0 | 4 | 4
---------------------------------------------
====================================
Melting Point Fit (MPFit)
====================================
Tm = 2598.43 K
Uncertainty = 108.65 K
====================================
Wrote /data/qhong7/qhong7/sluschi_auto/04cae928-20bb-478d-b821-436f264b2188/Ta30/Dir_lammps/cost_table.out
Collected 44 log files
====================================
Computational cost summary:
Number of trajectories (temp/id) = 12
Total log files (incl. subruns) = 44
Total wall time = 1:21:24
Total seconds = 4884
Total GPU hours = 1.36
====================================
Ta30 1.0 10.2244128700000001 -0.0000113000000000 0.0000003000000000 -0.0000113100000000 10.2243991600000008 -0.0000008800000000 0.0000001600000000 0.0000000600000000 5.3030315000000003 Ta 30 direct 0.9654549900000000 0.3718037300000000 0.0000001100000000 Ta 0.2606604800000000 0.9324534100000000 0.5000000500000000 Ta 0.3187728700000000 0.6812151900000000 0.7493286100000000 Ta 0.1281930300000000 0.4654865400000000 0.4999999100000000 Ta 0.8717948800000000 0.5345101600000000 0.4999998300000000 Ta 0.8949662400000000 0.1050675500000000 -0.0000001400000000 Ta 0.8188031800000000 0.8187697300000000 0.7506683199999999 Ta 0.1811984400000000 0.1812115500000000 0.2493289200000000 Ta 0.7393386400000000 0.0675556800000000 0.5000000900000000 Ta 0.9324613400000000 0.2606814800000000 0.4999999600000000 Ta 0.3949612700000000 0.3949743700000000 0.5000000300000000 Ta 0.5000057400000000 0.5000012700000001 0.0000000200000000 Ta 0.5345052200000000 0.8717936800000000 0.5000000500000000 Ta 0.5675154600000000 0.7606520800000000 -0.0000000700000000 Ta 0.0345326300000000 0.6281992600000000 0.0000000400000000 Ta 0.6050484200000000 0.6050225500000000 0.5000000400000000 Ta 0.3187729100000000 0.6812152100000000 0.2506714600000000 Ta 0.6812317400000000 0.3188055900000000 0.2506754800000000 Ta 0.0000082400000000 0.0000017900000000 0.4999999800000000 Ta 0.8188031000000000 0.8187693000000000 0.2493319700000000 Ta 0.6812317200000000 0.3188056500000000 0.7493244700000000 Ta 0.4324811600000000 0.2393419500000000 -0.0000001200000000 Ta 0.1811984400000000 0.1812115000000000 0.7506710900000000 Ta 0.7606717800000000 0.5675049900000000 -0.0000001900000000 Ta 0.3717931400000000 0.9654606800000000 0.0000000900000000 Ta 0.0675440300000000 0.7393205800000000 0.5000000200000000 Ta 0.6281935700000000 0.0345349300000000 -0.0000000600000000 Ta 0.4654792700000000 0.1281987700000000 0.5000000300000000 Ta 0.2393249700000000 0.4324875300000000 0.0000000600000000 Ta 0.1050531000000000 0.8949433100000000 -0.0000000600000000 Ta
No output files have been received yet.